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L3_114_237G1_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_237G1_scaffold_69_1
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..135)
DNA (135bp) protein (45aa)
30S ribosomal protein S2 n=4 Tax=Bifidobacterium RepID=RS2_BIFAA
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_114_237G1_scaffold_69_2
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(397..882)
DNA (486bp) protein (162aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Peptide deformylase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5U6_BIFAD
peptide deformylase 2
L3_114_237G1_scaffold_69_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(885..2924)
DNA (2040bp) protein (680aa)
Long-chain-fatty acid CoA ligase {ECO:0000313|EMBL:KFI98480.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFI98480.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
AMP-binding enzyme n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5U7_BIFAD
long-chain-fatty acid CoA ligase
L3_114_237G1_scaffold_69_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3041..3691)
DNA (651bp) protein (217aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A1H6_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76246.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_69_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3840..4958)
DNA (1119bp) protein (373aa)
IMP dehydrogenase family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5U9_BIFAD
GMP reductase
IMP dehydrogenase family protein {ECO:0000313|EMBL:EDN82937.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_114_237G1_scaffold_69_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5094..6314
DNA (1221bp) protein (407aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Isocitrate dehydrogenase [NADP] n=3 Tax=root RepID=A1A1H4_BIFAA
isocitrate dehydrogenase
L3_114_237G1_scaffold_69_7
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6436..7944
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H7A1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY20641.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L3_114_237G1_scaffold_69_8
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8024..9853)
DNA (1830bp) protein (610aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GXX7_9BIFI
AMP-binding enzyme {ECO:0000313|EMBL:CCY20639.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
long-chain-fatty-acid--CoA ligase
L3_114_237G1_scaffold_69_9
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9966..10751)
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A1H1_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY20637.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_114_237G1_scaffold_69_10
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10755..11141
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R5GTC4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY20635.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L3_114_237G1_scaffold_69_11
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11468..12169)
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H6U2_9BIFI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY20632.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
ABC transporter, ATP-binding protein
L3_114_237G1_scaffold_69_12
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12276..14051
DNA (1776bp) protein (592aa)
Putative YjeF domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GTX6_9BIFI
Putative YjeF domain protein {ECO:0000313|EMBL:CCY20628.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
carbohydrate kinase superfamily protein
L3_114_237G1_scaffold_69_13
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14067..16238)
DNA (2172bp) protein (724aa)
Efflux ABC transporter permease protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H6T9_9BIFI
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCY20627.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
efflux ABC transporter, permease protein
L3_114_237G1_scaffold_69_14
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16425..17363)
DNA (939bp) protein (313aa)
Efflux ABC transporter permease protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H789_9BIFI
ABC transporter
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CCY20626.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_114_237G1_scaffold_69_15
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17357..18058)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GXW3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY20624.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
ABC transporter
L3_114_237G1_scaffold_69_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18280..18969
DNA (690bp) protein (230aa)
Possible alpha beta hydrolase n=3 Tax=Bifidobacterium RepID=A1A1G6_BIFAA
alpha beta hydrolase
Possible alpha beta hydrolase {ECO:0000313|EMBL:BAF39549.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_114_237G1_scaffold_69_17
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19122..20054
DNA (933bp) protein (311aa)
Transcriptional regulator LysR family n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H6T4_9BIFI
Transcriptional regulator CpsY {ECO:0000313|EMBL:KFI98492.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
transcriptional regulator CpsY
L3_114_237G1_scaffold_69_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20174..20869)
DNA (696bp) protein (232aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Orotate phosphoribosyltransferase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5W4_BIFAD
orotate phosphoribosyltransferase
L3_114_237G1_scaffold_69_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20906..21853)
DNA (948bp) protein (316aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Dihydroorotate dehydrogenase n=2 Tax=Bifidobacterium adolescentis RepID=A1A1G2_BIFAA
pyrD; dihydroorotate dehydrogenase
L3_114_237G1_scaffold_69_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21856..22674)
DNA (819bp) protein (273aa)
Probable dihydroorotate dehydrogenase electron transfer subunit n=2 Tax=Bifidobacterium RepID=A1A1G1_BIFAA
pyrK; dihydroorotate dehydrogenase electron transfer subunit
2-polyprenylphenol hydroxylase {ECO:0000313|EMBL:KIM01110.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_69_21
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22714..23676)
DNA (963bp) protein (321aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQC5_9BIFI
orotidine 5'-phosphate decarboxylase
L3_114_237G1_scaffold_69_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23676..25094)
DNA (1419bp) protein (473aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Dihydroorotase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5W8_BIFAD
pyrC; dihydroorotase
L3_114_237G1_scaffold_69_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25099..25518)
DNA (420bp) protein (140aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein {ECO:0000313|EMBL:EDN82957.1}; EC=2.1.3.2 {ECO:0000313|EMBL:EDN82957.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=2 Tax=Bifidobacterium RepID=A7A5W9_BIFAD
aspartate carbamoyltransferase regulatory chain
L3_114_237G1_scaffold_69_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25518..26531)
DNA (1014bp) protein (338aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Aspartate carbamoyltransferase n=2 Tax=Bifidobacterium RepID=C0BT84_9BIFI
L3_114_237G1_scaffold_69_25
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26640..29750)
DNA (3111bp) protein (1037aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
[glutamate--ammonia-ligase] adenylyltransferase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3D3_9BIFI
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
L3_114_237G1_scaffold_69_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29842..30681)
DNA (840bp) protein (280aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Methylenetetrahydrofolate reductase n=2 Tax=Bifidobacterium RepID=A1A1F5_BIFAA
5,10-methylenetetrahydrofolate reductase
L3_114_237G1_scaffold_69_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30724..33030)
DNA (2307bp) protein (769aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPY9_9BIFI
5-methyltetrahydropteroyltriglutamate--homocyste ine S-methyltransferase
L3_114_237G1_scaffold_69_28
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33219..33623)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3E0_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY19472.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_114_237G1_scaffold_69_29
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33754..34314)
DNA (561bp) protein (187aa)
Phosphoglycerate mutase family protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQE1_9BIFI
hypothetical protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CCY19473.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_114_237G1_scaffold_69_30
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34413..35468)
DNA (1056bp) protein (352aa)
Methyltransferase {ECO:0000313|EMBL:KFI98505.1}; EC=2.1.1.220 {ECO:0000313|EMBL:KFI98505.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Methyltransferase domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GUL9_9BIFI
tRNA (adenine-N(1)-)-methyltransferase
Displaying items 1-30 of 68 in total

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