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L3_114_237G1_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_237G1_scaffold_172_1
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..166
DNA (165bp) protein (55aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FGK3_9BIFI
phosphoglyceromutase
L3_114_237G1_scaffold_172_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(394..2274)
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A489_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN83722.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
myosin-cross-reactive antigen
L3_114_237G1_scaffold_172_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2595..3275)
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C8_BIFAA
response regulator of two-component system
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3388..4647
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Sensor protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C9_BIFAA
sensor protein
L3_114_237G1_scaffold_172_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4767..5021)
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0D0_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN83725.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_114_237G1_scaffold_172_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5048..6190)
DNA (1143bp) protein (381aa)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Putative phosphoserine transaminase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A493_BIFAD
L3_114_237G1_scaffold_172_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6397..7329
DNA (933bp) protein (311aa)
CHAP domain protein n=2 Tax=Bifidobacterium RepID=A7A494_BIFAD
hypothetical protein
Amidase {ECO:0000313|EMBL:KIM02238.1}; CHAP domain containing protein {ECO:0000313|EMBL:AII75816.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05387.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7392..8141
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A0D3_BIFAA
NlpC/P60 family protein
NlpC/P60 family protein {ECO:0000313|EMBL:EDN83728.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_114_237G1_scaffold_172_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8303..9337
DNA (1035bp) protein (345aa)
Universal stress family protein n=2 Tax=Bifidobacterium RepID=A7A496_BIFAD
universal stress family protein
Universal stress family protein {ECO:0000313|EMBL:AII75818.1}; Universal stress protein {ECO:0000313|EMBL:KIM02236.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_10

Not on your lists

comp(9442..9855)
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0D5_BIFAA
Putative OsmC-like protein
Uncharacterized protein {ECO:0000313|EMBL:CDX10507.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L3_114_237G1_scaffold_172_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10184..10984
DNA (801bp) protein (267aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GME8_9BIFI
L3_114_237G1_scaffold_172_12
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11063..11728
DNA (666bp) protein (222aa)
Dihydrofolate reductase {ECO:0000313|EMBL:KFI96567.1}; EC=1.5.1.3 {ECO:0000313|EMBL:KFI96567.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Dihydrofolate reductase n=2 Tax=Bifidobacterium adolescentis RepID=A1A0D7_BIFAA
dihydrofolate reductase
L3_114_237G1_scaffold_172_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11735..12238
DNA (504bp) protein (168aa)
Low molecular weight protein-tyrosine-phosphatase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0D8_BIFAA
low molecular weight protein-tyrosine-phosphatase
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:AJE05394.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_14
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12905..13915)
DNA (1011bp) protein (337aa)
UDP-glucose 4-epimerase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRF0_9BIFI
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCY19808.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_114_237G1_scaffold_172_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14084..14956
DNA (873bp) protein (291aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GVH9_9BIFI
tRNA (guanine-N(7)-)-methyltransferase
L3_114_237G1_scaffold_172_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15627..17783
DNA (2157bp) protein (719aa)
Nucleoside-diphosphate-sugar epimerase and GAF domain n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0E1_BIFAA
nucleoside-diphosphate-sugar epimerase and GAF domain
Nucleoside-diphosphate-sugar epimerase and GAF domain {ECO:0000313|EMBL:AJE05397.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17783..18700
DNA (918bp) protein (306aa)
Predicted membrane protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0E2_BIFAA
membrane spanning protein
Membrane spanning protein {ECO:0000313|EMBL:AII75826.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18697..20565
DNA (1869bp) protein (623aa)
Predicted membrane protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0E3_BIFAA
Membrane protein {ECO:0000313|EMBL:KIM01386.1}; Putative membrane protein {ECO:0000313|EMBL:AJE05399.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
putative membrane protein
L3_114_237G1_scaffold_172_19
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20562..21980
DNA (1419bp) protein (473aa)
Glycosyltransferase I n=2 Tax=Bifidobacterium RepID=A1A0E4_BIFAA
glycosyltransferase I
Glycosyltransferase I {ECO:0000313|EMBL:CCY19820.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_114_237G1_scaffold_172_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21982..23460
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0E5_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39178.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_114_237G1_scaffold_172_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23496..25304
DNA (1809bp) protein (603aa)
Spore coat protein H n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRG6_9BIFI
Spore coat protein H {ECO:0000313|EMBL:AJE05402.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
spore coat protein H
L3_114_237G1_scaffold_172_22
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25294..26112
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQX4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY19825.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L3_114_237G1_scaffold_172_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26238..26903
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H4E4_9BIFI
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KIM01382.1}; Uncharacterized protein {ECO:0000313|EMBL:AII75832.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26947..29115
DNA (2169bp) protein (723aa)
Diguanylate cyclase {ECO:0000313|EMBL:KFI96579.1}; EC=3.1.4.52 {ECO:0000313|EMBL:KFI96579.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRH0_9BIFI
putative diguanylate cyclase (GGDEF) domain protein
L3_114_237G1_scaffold_172_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29294..30445
DNA (1152bp) protein (384aa)
Possible lactaldehyde reductase n=3 Tax=Bifidobacterium RepID=A1A0F1_BIFAA
L-1,2-propanediol oxidoreductase
Putative lactaldehyde reductase {ECO:0000313|EMBL:EDN83738.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_114_237G1_scaffold_172_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30577..31533)
DNA (957bp) protein (319aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Bifidobacterium RepID=A7A4A6_BIFAD
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AJE05407.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31558..33081
DNA (1524bp) protein (508aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4A7_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN83740.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_114_237G1_scaffold_172_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33081..34304
DNA (1224bp) protein (408aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Bifidobacterium RepID=A7A4A8_BIFAD
putative transmembrane protein
N-acetylglucosaminyltransferase {ECO:0000313|EMBL:KIM01377.1}; Putative transmembrane protein {ECO:0000313|EMBL:AJE05409.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_114_237G1_scaffold_172_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34403..35848
DNA (1446bp) protein (482aa)
Hypothetical secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0F5_BIFAA
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KIM01376.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
putative secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain
L3_114_237G1_scaffold_172_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35920..36492
DNA (573bp) protein (191aa)
Hypoxanthine-guanine phosphoribosyltransferase n=3 Tax=Bifidobacterium RepID=A1A0F6_BIFAA
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KIM01375.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hprT; hypoxanthine-guanine phosphoribosyltransferase
Displaying items 1-30 of 45 in total

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