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L3_114_237G1_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_237G1_scaffold_214_1
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(141..335)
DNA (195bp) protein (65aa)
Transposase, IS4 family n=2 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GU33_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:EJP23180.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
L3_114_237G1_scaffold_214_2
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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449..1618
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LUD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO53071.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L3_114_237G1_scaffold_214_3
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1776..2069
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LZD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO49588.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L3_114_237G1_scaffold_214_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2924..3565
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEF9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27193.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
putative zinc metallopeptidase
L3_114_237G1_scaffold_214_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3590..4636
DNA (1047bp) protein (349aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Cell wall binding repeat-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7C2_9CLOT
surface protein PspC
L3_114_237G1_scaffold_214_6
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4856..5272
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R6S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EIC95384.1}; TaxID=1095750 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum F0468.;"
L3_114_237G1_scaffold_214_7
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5473..5745
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium OBRC5-5 RepID=K0Y2I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETO95129.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
L3_114_237G1_scaffold_214_8
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5800..6030
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LVF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO52432.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L3_114_237G1_scaffold_214_9
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6196..6717
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K7I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP19331.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
rps3p; ribosomal protein S3P Rps3p
L3_114_237G1_scaffold_214_10
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6837..7883
DNA (1047bp) protein (349aa)
ABC transporter, phosphonate, periplasmic substrate-binding protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TC64_9FIRM
ABC transporter, phosphonate, periplasmic substrate-binding protein {ECO:0000313|EMBL:EJP19349.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_237G1_scaffold_214_11
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7887..8639
DNA (753bp) protein (251aa)
ABC transporter, permease protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GL11_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EJP19338.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L3_114_237G1_scaffold_214_12
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8639..9184
DNA (546bp) protein (182aa)
ABC transporter, ATP-binding protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GL57_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJP19378.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_237G1_scaffold_214_13
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9187..10182
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GED2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJP19425.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
hypothetical protein
L3_114_237G1_scaffold_214_14
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10187..11290
DNA (1104bp) protein (368aa)
PF01594 domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J5GL26_9FIRM
PF01594 domain protein {ECO:0000313|EMBL:EJP19353.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
permease
L3_114_237G1_scaffold_214_15
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11444..12703
DNA (1260bp) protein (420aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4K7J0_9FIRM
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:EJP19356.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
PDZ/DHR/GLGF domain-containing protein
L3_114_237G1_scaffold_214_16
Lachnoanaerobaculum sp. ICM7, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12715..13662
DNA (948bp) protein (316aa)
HDIG domain protein n=1 Tax=Lachnospiraceae bacterium ICM7 RepID=J4TC86_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EJP19394.1}; TaxID=936594 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. ICM7.;"
metal dependent phosphohydrolase
L3_114_237G1_scaffold_214_17
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13726..15129
DNA (1404bp) protein (468aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LVE1_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EHO52422.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
TrmA family RNA methyltransferase
L3_114_237G1_scaffold_214_18
Streptococcus constellatus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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15389..16060
DNA (672bp) protein (224aa)
Uncharacterized protein n=4 Tax=Streptococcus constellatus subsp. pharyngis RepID=T1Z5U7_STRCV
hypothetical protein
Recombinase {ECO:0000313|EMBL:EGV07884.1}; Uncharacterized protein {ECO:0000313|EMBL:GAD44050.1}; TaxID=1035184 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377.;"
L3_114_237G1_scaffold_214_19
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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16344..16988
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Streptococcus mitis (strain B6) RepID=D3H905_STRM6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBJ22350.1}; TaxID=365659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis (strain B6).;"
L3_114_237G1_scaffold_214_20
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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17497..19110
DNA (1614bp) protein (538aa)
Type I restriction modification DNA specificity domain protein n=2 Tax=Streptococcus anginosus RepID=E6J267_STRAP
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EFU22003.1}; TaxID=706437 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus F0211.;"
restriction endonuclease subunit S
L3_114_237G1_scaffold_214_21
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19123..19875
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Streptococcus anginosus 1505 RepID=U2ZGJ7_STRAP
restriction endonuclease subunit M
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:EFU22004.1}; TaxID=706437 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus F0211.;"
L3_114_237G1_scaffold_214_22
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19912..21543
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Streptococcus anginosus 1505 RepID=U2ZGJ7_STRAP
restriction endonuclease subunit M
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EOS72682.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L3_114_237G1_scaffold_214_23
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21527..23023
DNA (1497bp) protein (499aa)
Uncharacterized protein n=2 Tax=Streptococcus anginosus RepID=U2Y5K0_STRAP
DNA methyltransferase
Putative type I restriction-modification system, M subunit {ECO:0000313|EMBL:EFU22048.1}; TaxID=706437 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus F0211.;"
L3_114_237G1_scaffold_214_24
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23010..24047
DNA (1038bp) protein (346aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Streptococcus anginosus F0211 RepID=E6J2B3_STRAP
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EFU22049.1}; TaxID=706437 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus F0211.;"
hypothetical protein
L3_114_237G1_scaffold_214_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24091..24258
DNA (168bp) protein (56aa)
Lactoylglutathione lyase and related lyases n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4L3_9CLOT
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CDA10603.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Lactoylglutathione lyase and related lyases
L3_114_237G1_scaffold_214_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24383..24763
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQ34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32635.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Resolvase
L3_114_237G1_scaffold_214_27
unknown

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24941..25804
DNA (864bp) protein (288aa)

This feature has no annotations

L3_114_237G1_scaffold_214_28
Streptococcus sp. SR1, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25820..26053
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQ33_9FIRM
Cro/C1-type HTH DNA-binding domain protein {ECO:0000313|EMBL:EUC79357.1}; TaxID=1161416 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. SR1.;"
helix-turn-helix domain protein
L3_114_237G1_scaffold_214_29
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26066..26671
DNA (606bp) protein (202aa)
Uncharacterized protein n=4 Tax=Lactobacillales RepID=R3KYD6_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:EOK47598.1}; TaxID=1151187 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0062.;"
hypothetical protein
L3_114_237G1_scaffold_214_30
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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26685..27536
DNA (852bp) protein (284aa)
Excinuclease ABC subunit C n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GMM0_9FIRM
Excinuclease ABC subunit C {ECO:0000313|EMBL:CDE27217.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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