ggKbase home page

L3_114_237G1_scaffold_240

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_237G1_scaffold_240_1
unknown

Not on your lists

1..222
DNA (222bp) protein (74aa)

This feature has no annotations

L3_114_237G1_scaffold_240_2
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(296..1741)
DNA (1446bp) protein (482aa)
Na+/xyloside symporter related transporter n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUW5_BIFA0
Na+/xyloside symporter related transporter
Na+/xyloside symporter related transporter {ECO:0000313|EMBL:ACL29794.1}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
L3_114_237G1_scaffold_240_3
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1930..3747)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=G2SUD0_BIFAN
Hypothetical cytosolic protein {ECO:0000313|EMBL:ADC84969.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
cytosolic protein
L3_114_237G1_scaffold_240_4
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3965..5014
DNA (1050bp) protein (350aa)
LacI-type transcriptional regulator n=9 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUW7_BIFA0
LacI-type transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:ACL29796.1}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
L3_114_237G1_scaffold_240_5
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5085..5840
DNA (756bp) protein (252aa)
NAD-dependent protein deacetylase n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=C6A9X8_BIFLB
NAD-dependent protein deacetylase
SIR2 family protein {ECO:0000313|EMBL:ADC84971.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
L3_114_237G1_scaffold_240_6
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5998..7263)
DNA (1266bp) protein (422aa)
Threonine ammonia-lyase (EC:4.3.1.19)
Threonine dehydratase {ECO:0000313|EMBL:ADC84972.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ADC84972.1};; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
Threonine dehydratase n=8 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R790_BIFAB
L3_114_237G1_scaffold_240_7
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7423..9156)
DNA (1734bp) protein (578aa)
Oligo-1,6-glucosidase {ECO:0000313|EMBL:ADC84973.1}; EC=3.2.1.10 {ECO:0000313|EMBL:ADC84973.1};; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
oligo-1,6-glucosidase (EC:3.2.1.10)
Oligo-1,6-glucosidase n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R791_BIFAB
L3_114_237G1_scaffold_240_8
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9957..10913
DNA (957bp) protein (319aa)
Uncharacterized protein n=11 Tax=Bifidobacterium animalis subsp. lactis RepID=G2SUD6_BIFAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC84975.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
L3_114_237G1_scaffold_240_9
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11354..13246)
DNA (1893bp) protein (631aa)
Alpha-galactosidase n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUX2_BIFA0
Alpha-galactosidase {ECO:0000313|EMBL:ACL29801.1}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
Raffinose synthase (Sip1 seed imbibition) like protein
L3_114_237G1_scaffold_240_10
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14199..15104)
DNA (906bp) protein (302aa)
Sugar permease of ABC transporter system n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUX3_BIFA0
Raffinose transport system permease protein
Sugar permease of ABC transporter system {ECO:0000313|EMBL:ACL29802.1}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
L3_114_237G1_scaffold_240_11
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15109..16101)
DNA (993bp) protein (331aa)
MalF-type ABC sugar transport systems permease component n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=C6A9Y5_BIFLB
msmF; Multiple sugar ABC transporter, membrane-spanning permease MsmF
Raffinose transport system permease protein {ECO:0000313|EMBL:ADC84980.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
L3_114_237G1_scaffold_240_12
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16135..17397)
DNA (1263bp) protein (421aa)
Raffinose-binding protein n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R799_BIFAB
Raffinose-binding protein
Raffinose-binding protein {ECO:0000313|EMBL:ADC84981.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
L3_114_237G1_scaffold_240_13
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17579..18787
DNA (1209bp) protein (403aa)
Xylose repressor n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7A0_BIFAB
Xylose repressor
Xylose repressor {ECO:0000313|EMBL:ADC84982.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
L3_114_237G1_scaffold_240_14
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18812..21034)
DNA (2223bp) protein (741aa)
Alpha-galactosidase {ECO:0000313|EMBL:ACL29806.1}; EC=3.2.1.22 {ECO:0000313|EMBL:ACL29806.1};; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUX7_BIFA0
L3_114_237G1_scaffold_240_15
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21150..21608)
DNA (459bp) protein (153aa)
tRNA-specific adenosine deaminase (EC:3.5.4.-)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
tRNA-specific adenosine deaminase n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7A2_BIFAB
L3_114_237G1_scaffold_240_16
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21770..23881
DNA (2112bp) protein (704aa)
NhaP n=2 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7A3_BIFAB
NhaP {ECO:0000313|EMBL:ADC84985.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
NhaP
L3_114_237G1_scaffold_240_17
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23952..24473)
DNA (522bp) protein (174aa)
COBF protein {ECO:0000313|EMBL:ADC84986.1}; EC=2.1.1.- {ECO:0000313|EMBL:ADC84986.1};; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
COBF protein n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7A4_BIFAB
phospholipase/carboxylesterase
L3_114_237G1_scaffold_240_18
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24827..26386)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=G2SUE6_BIFAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL29810.1}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
L3_114_237G1_scaffold_240_19
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26436..27017)
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=703613 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM; 20104 / JCM 1190 / R101-8).;"
Deoxycytidine triphosphate deaminase n=13 Tax=Bifidobacterium animalis RepID=DCD_BIFA0
dCTP deaminase
L3_114_237G1_scaffold_240_20
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27227..30217)
DNA (2991bp) protein (997aa)
Cation-transporting ATPase PacL n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUY3_BIFA0
Cation-transporting ATPase PacL {ECO:0000313|EMBL:ACL29812.1}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
pacL; cation-transporting ATPase PacL
L3_114_237G1_scaffold_240_21
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30532..31527
DNA (996bp) protein (332aa)
23S rRNA Gm2251-methyltransferase (EC:2.1.1.-)
tRNA/rRNA methyltransferase n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUY4_BIFA0
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:ACL29813.1}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
L3_114_237G1_scaffold_240_22
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31676..33124)
DNA (1449bp) protein (483aa)
Lipopolysaccharide kinase (Kdo/WaaP) domain protein n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=G2SUF0_BIFAN
Chromosome segregation ATPase
Uncharacterized protein {ECO:0000313|EMBL:ACL29814.1}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
L3_114_237G1_scaffold_240_23
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33332..34465)
DNA (1134bp) protein (378aa)
malK; maltose/maltodextrin transport ATP-binding protein MalK (EC:3.6.3.19)
ATP binding protein of ABC transporter for sugars n=12 Tax=Bifidobacterium animalis RepID=B8DUY6_BIFA0
ATP binding protein of sugar ABC transporter {ECO:0000313|EMBL:AFI63747.1}; TaxID=703613 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM; 20104 / JCM 1190 / R101-8).;"
L3_114_237G1_scaffold_240_24
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34889..35911
DNA (1023bp) protein (341aa)
Potassium channel protein n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7B3_BIFAB
potassium voltage-gated channel subfamily protein
Potassium channel protein {ECO:0000313|EMBL:ADC84995.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
L3_114_237G1_scaffold_240_25
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35981..38098
DNA (2118bp) protein (706aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:ADC84996.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ADC84996.1};; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
Serine/threonine protein kinase n=11 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7B4_BIFAB
Serine/threonine protein kinase
L3_114_237G1_scaffold_240_26
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38478..39416
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Bifidobacterium animalis subsp. lactis ATCC 27673 RepID=U3Q8V9_BIFAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI67037.1}; TaxID=1402194 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. animalis IM386.;"
L3_114_237G1_scaffold_240_27
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40084..41631
DNA (1548bp) protein (516aa)
Rpf protein n=11 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7B6_BIFAB
Rpf protein {ECO:0000313|EMBL:ADC84998.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
Cell wall-binding protein
L3_114_237G1_scaffold_240_28
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


41773..42546
DNA (774bp) protein (258aa)
Dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
Ribosomal RNA small subunit methyltransferase A n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7B7_BIFAB
L3_114_237G1_scaffold_240_29
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42550..43506
DNA (957bp) protein (319aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=442563 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain AD011).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DUZ2_BIFA0
L3_114_237G1_scaffold_240_30
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43578..44204
DNA (627bp) protein (209aa)
Uncharacterized protein n=12 Tax=Bifidobacterium animalis subsp. lactis RepID=I6PLZ4_BIFAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC85001.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
Displaying items 1-30 of 91 in total

View Taxonomy