ggKbase home page

L3_114_237G1_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 226 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_237G1_scaffold_52_1
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..82)
DNA (81bp) protein (27aa)
Transposase and inactivated derivative n=2 Tax=Rothia mucilaginosa RepID=D2NS55_ROTMD
transposase and inactivated derivative
Transposase and inactivated derivative {ECO:0000313|EMBL:BAI64481.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
L3_114_237G1_scaffold_52_2
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1140..4247)
DNA (3108bp) protein (1036aa)
UPF0182 protein ROTMU0001_0849 n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3Z6_9MICC
UPF0182 protein ROTMU0001_0849 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
hypothetical protein
L3_114_237G1_scaffold_52_3
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4520..5743)
DNA (1224bp) protein (408aa)
Predicted secreted protein containing a PDZ domain n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NS53_ROTMD
hypothetical protein
Predicted secreted protein containing a PDZ domain {ECO:0000313|EMBL:BAI64479.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
L3_114_237G1_scaffold_52_4
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6042..7505
DNA (1464bp) protein (488aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQQ7_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88305.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
hypothetical protein
L3_114_237G1_scaffold_52_5
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7630..8262)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3Z3_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EET75557.1}; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
putative metal-dependent hydrolase
L3_114_237G1_scaffold_52_6
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8246..10165)
DNA (1920bp) protein (640aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
UvrD/REP helicase n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3Z2_9MICC
superfamily I DNA and RNA helicase
L3_114_237G1_scaffold_52_7
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10491..11492
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQQ4_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88302.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
putative aminoglycoside phosphotransferase
L3_114_237G1_scaffold_52_8
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12483..17273)
DNA (4791bp) protein (1597aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQQ3_9MICC
superfamily I DNA and RNA helicase
L3_114_237G1_scaffold_52_9
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17353..21243)
DNA (3891bp) protein (1297aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
UvrD/REP helicase n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3Y9_9MICC
superfamily I DNA and RNA helicase
L3_114_237G1_scaffold_52_10
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21436..22131
DNA (696bp) protein (232aa)
DNA polymerase III, epsilon subunit n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NS45_ROTMD
DNA polymerase III subunit epsilon
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:BAI64471.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
L3_114_237G1_scaffold_52_11
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22297..23664
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQQ0_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88298.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
hypothetical protein
L3_114_237G1_scaffold_52_12
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23874..25223
DNA (1350bp) protein (450aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQP9_9MICC
glutamate-1-semialdehyde aminotransferase
L3_114_237G1_scaffold_52_13
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25255..26436
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQP8_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88296.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
glucose/sorbosone dehydrogenase
L3_114_237G1_scaffold_52_14
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26589..27782
DNA (1194bp) protein (398aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQP7_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88295.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
di- and tricarboxylate transporter
L3_114_237G1_scaffold_52_15
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27848..29032
DNA (1185bp) protein (395aa)
Di-and tricarboxylate transporter n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NS40_ROTMD
di- and tricarboxylate transporter
Di-and tricarboxylate transporter {ECO:0000313|EMBL:BAI64466.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
L3_114_237G1_scaffold_52_16
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29187..30365
DNA (1179bp) protein (393aa)
Predicted transcriptional regulator n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NS39_ROTMD
putative transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAI64465.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
L3_114_237G1_scaffold_52_17
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30436..31437)
DNA (1002bp) protein (334aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NS38_ROTMD
delta-aminolevulinic acid dehydratase
L3_114_237G1_scaffold_52_18
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31493..32392)
DNA (900bp) protein (300aa)
Uroporphyrinogen-III synthase n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQP4_9MICC
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EHB88292.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
uroporphyrinogen-III synthase
L3_114_237G1_scaffold_52_19
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32398..33531)
DNA (1134bp) protein (378aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
Porphobilinogen deaminase n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQP3_9MICC
porphobilinogen deaminase
L3_114_237G1_scaffold_52_20
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33715..35163)
DNA (1449bp) protein (483aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
Ferrochelatase n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQP2_9MICC
protoheme ferro-lyase
L3_114_237G1_scaffold_52_21
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35160..35981)
DNA (822bp) protein (274aa)
Chlorite O(2)-lyase n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3X8_9MICC
Chlorite O(2)-lyase {ECO:0000313|EMBL:EET75542.1}; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
hypothetical protein
L3_114_237G1_scaffold_52_22
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36117..37667)
DNA (1551bp) protein (517aa)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:EET75541.1}; EC=1.3.3.4 {ECO:0000313|EMBL:EET75541.1};; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
Protoporphyrinogen oxidase n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3X7_9MICC
protoporphyrinogen oxidase
L3_114_237G1_scaffold_52_23
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37806..38987)
DNA (1182bp) protein (394aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
Uroporphyrinogen decarboxylase n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3X6_9MICC
uroporphyrinogen-III decarboxylase
L3_114_237G1_scaffold_52_24
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39227..40471
DNA (1245bp) protein (415aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
Glutamyl-tRNA reductase n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQN8_9MICC
glutamyl-tRNA reductase
L3_114_237G1_scaffold_52_25
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40703..40930
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQN7_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88285.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
subtilisin-like serine protease
L3_114_237G1_scaffold_52_26
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41421..43163
DNA (1743bp) protein (581aa)
Superfamily II DNA and RNA helicase n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NS27_ROTMD
Superfamily II DNA and RNA helicase {ECO:0000313|EMBL:BAI64453.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus).;"
superfamily II DNA and RNA helicase
L3_114_237G1_scaffold_52_27
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43172..44443
DNA (1272bp) protein (424aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3X2_9MICC
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EET75536.1}; TaxID=553201 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa ATCC 25296.;"
adenine specific DNA methylase Mod
L3_114_237G1_scaffold_52_28
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44654..45469
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQN4_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88282.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
parvulin-like peptidyl-prolyl isomerase
L3_114_237G1_scaffold_52_29
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45525..45968)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQN3_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88281.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
endopolygalacturonase
L3_114_237G1_scaffold_52_30
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46066..47034)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Rothia mucilaginosa M508 RepID=G5EQN1_9MICC
Uncharacterized protein {ECO:0000313|EMBL:EHB88279.1}; TaxID=563033 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa M508.;"
putative metal-dependent phosphoesterase
Displaying items 1-30 of 226 in total

View Taxonomy