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L3_114_360G1_scaffold_4112

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_4112_1
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..594
DNA (594bp) protein (198aa)
Intein C-terminal splicing region n=1 Tax=Clostridium sp. L2-50 RepID=A7VI55_9CLOT
Intein C-terminal splicing region {ECO:0000313|EMBL:EDO56914.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
phosphoglycerate kinase
L3_114_360G1_scaffold_4112_2
unknown

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596..1078
DNA (483bp) protein (161aa)

This feature has no annotations

L3_114_360G1_scaffold_4112_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1291..1821
DNA (531bp) protein (177aa)
Intein C-terminal splicing region n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VQK5_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04964.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_360G1_scaffold_4112_4
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1834..2367
DNA (534bp) protein (178aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SF15_RUMAL
Conserved domain protein {ECO:0000313|EMBL:EGC02119.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L3_114_360G1_scaffold_4112_5
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2401..2949
DNA (549bp) protein (183aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SF17_RUMAL
Conserved domain protein {ECO:0000313|EMBL:EGC02140.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L3_114_360G1_scaffold_4112_6
unknown

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2960..3199
DNA (240bp) protein (80aa)

This feature has no annotations

L3_114_360G1_scaffold_4112_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3154..3432
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Acinetobacter RepID=Q6FDM0_ACIAD
phosphoglycerate kinase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
L3_114_360G1_scaffold_4112_8
unknown

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3434..3862
DNA (429bp) protein (143aa)

This feature has no annotations

L3_114_360G1_scaffold_4112_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3878..4198
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4R0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51960.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
DNase/tRNase domain of colicin-like bacteriocin family protein
L3_114_360G1_scaffold_4112_10
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4216..4686
DNA (471bp) protein (157aa)
SMI1/KNR4 family protein n=1 Tax=Ruminococcus albus 8 RepID=E9SF19_RUMAL
SMI1/KNR4 family protein {ECO:0000313|EMBL:EGC02154.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
putative glucan synthasis protein
L3_114_360G1_scaffold_4112_11
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4914..5393
DNA (480bp) protein (160aa)
MchA1 n=4 Tax=Moraxella catarrhalis RepID=A5J2A2_MORCA
MchA1 {ECO:0000313|EMBL:ABI85300.1}; TaxID=480 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella catarrhalis.;"
hypothetical protein
L3_114_360G1_scaffold_4112_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5368..5871
DNA (504bp) protein (168aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SF21_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04648.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_360G1_scaffold_4112_13
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6072..6266
DNA (195bp) protein (65aa)
Intein C-terminal splicing region n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VQK5_9FIRM
Intein C-terminal splicing region {ECO:0000313|EMBL:CCZ82862.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein predicted by Glimmer/Critica
Displaying 13 items

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