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L3_114_360G1_scaffold_3132

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_3132_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..184
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X655_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95197.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative sensor
L3_114_360G1_scaffold_3132_2
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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302..940
DNA (639bp) protein (213aa)
histidine kinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E669C9
Histidine kinase {ECO:0000313|EMBL:ETD70557.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
two component transcriptional regulator, AraC family
L3_114_360G1_scaffold_3132_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1287..2822)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VXE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95194.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_114_360G1_scaffold_3132_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2857..3429)
DNA (573bp) protein (191aa)
Sigma-70 region 2 n=3 Tax=Clostridium RepID=D3ALA2_9CLOT
Sigma factor {ECO:0000313|EMBL:CCZ63347.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_114_360G1_scaffold_3132_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3507..4703)
DNA (1197bp) protein (399aa)
Cation diffusion facilitator family transporter n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X653_9CLOT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ENY95192.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
cation diffusion facilitator family transporter
L3_114_360G1_scaffold_3132_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4687..5439)
DNA (753bp) protein (251aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
tRNA pseudouridine synthase A n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XHX4_9CLOT
tRNA pseudouridine synthase A
L3_114_360G1_scaffold_3132_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5423..5896)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VWW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95190.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
VanZ family protein
L3_114_360G1_scaffold_3132_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5893..7059)
DNA (1167bp) protein (389aa)
dapL2; LL-diaminopimelate aminotransferase DapL (EC:2.6.1.83)
Aminotransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VXE2_9CLOT
Aminotransferase {ECO:0000313|EMBL:ENY95189.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Displaying 8 items

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