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L3_114_360G1_scaffold_3139

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_3139_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..188
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65566.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_114_360G1_scaffold_3139_2
unknown

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330..494
DNA (165bp) protein (55aa)

This feature has no annotations

L3_114_360G1_scaffold_3139_3
unknown

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497..964
DNA (468bp) protein (156aa)

This feature has no annotations

L3_114_360G1_scaffold_3139_4
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1161..1646
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00037BC0F7
Hedgehog/intein hint domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:GAE90851.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
L3_114_360G1_scaffold_3139_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1686..2027
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B2E227
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04620.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_360G1_scaffold_3139_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2014..2385
DNA (372bp) protein (124aa)
Hedgehog/intein hint domain protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MV98_CLOTM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04650.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_360G1_scaffold_3139_7
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2484..2981
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Photorhabdus temperata J3 RepID=U7QR41_PHOTE
Uncharacterized protein {ECO:0000313|EMBL:GAL58943.1}; Flags: Fragment;; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
Hedgehog/intein hint domain-containing protein
L3_114_360G1_scaffold_3139_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3037..3279
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QSM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38870.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_114_360G1_scaffold_3139_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3418..3837
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacillus thuringiensis (strain Al Hakam) RepID=A0RJQ0_BACAH
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04964.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_114_360G1_scaffold_3139_10
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3851..4258
DNA (408bp) protein (136aa)
SMI1 / KNR4 family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4Q5_9FIRM
SMI1 / KNR4 family protein {ECO:0000313|EMBL:EDM51955.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_114_360G1_scaffold_3139_11
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4290..4592
DNA (303bp) protein (101aa)
Hedgehog/intein hint domain protein n=2 Tax=Clostridium thermocellum RepID=E6URC1_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN54033.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_360G1_scaffold_3139_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4782..5294
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U4D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65672.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_114_360G1_scaffold_3139_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5329..5589
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2ME03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ97518.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_3139_14
Treponema saccharophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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5952..6305
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EH33_9SPIO
Putative uncharacterized protein {ECO:0000313|EMBL:EIC03100.1}; TaxID=907348 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema saccharophilum DSM 2985.;"
L3_114_360G1_scaffold_3139_15
unknown

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6653..6838
DNA (186bp) protein (62aa)

This feature has no annotations

L3_114_360G1_scaffold_3139_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6937..7188
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z4Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51952.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Putative uncharacterized protein SA0281
L3_114_360G1_scaffold_3139_17
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7200..7619
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5JZL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78965.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
L3_114_360G1_scaffold_3139_18
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7771..8181
DNA (411bp) protein (137aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SF15_RUMAL
Conserved domain protein {ECO:0000313|EMBL:EGC02119.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
Displaying 18 items

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