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L3_114_360G1_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 210 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_24_1
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(486..1823)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K021_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69620.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_24_2
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2057..2644
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K070_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69619.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_24_3
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2885..3601
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1A7_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE69618.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
putative zinc ABC transporter ATP-binding protein
L3_114_360G1_scaffold_24_4
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3638..4468
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3L9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69617.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L3_114_360G1_scaffold_24_5
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4800..5963
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K134_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69616.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_360G1_scaffold_24_6
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6050..7441)
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K017_9CLOT
asparaginyl-tRNA synthetase
L3_114_360G1_scaffold_24_7
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7603..8397
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K066_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69614.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Response regulator receiver domain.
L3_114_360G1_scaffold_24_8
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8510..9499
DNA (990bp) protein (330aa)
Putative sporulation transcription factor Spo0A n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1A0_9CLOT
Putative sporulation transcription factor Spo0A {ECO:0000313|EMBL:CDE69613.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
sporulation transcriptional activator Spo0A
L3_114_360G1_scaffold_24_9
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9681..11057
DNA (1377bp) protein (459aa)
Citrate synthase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3L5_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
citrate synthase
L3_114_360G1_scaffold_24_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11074..11868)
DNA (795bp) protein (265aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium sp. CAG:277 RepID=R7K130_9CLOT
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDE69611.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
binding-protein-dependent transport system inner membrane protein
L3_114_360G1_scaffold_24_11
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11861..12613)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K013_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69610.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L3_114_360G1_scaffold_24_12
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12737..13213
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K060_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69609.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_24_13
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13294..13812)
DNA (519bp) protein (173aa)
HAD-superfamily hydrolase subfamily IA variant 3 n=1 Tax=Clostridium sp. CAG:277 RepID=R7K195_9CLOT
HAD-superfamily hydrolase subfamily IA variant 3 {ECO:0000313|EMBL:CDE69608.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
HAD family hydrolase
L3_114_360G1_scaffold_24_14
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13950..15191
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3L0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69607.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_24_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15207..15926
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K126_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69606.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Predicted integral membrane protein
L3_114_360G1_scaffold_24_16
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15919..18201
DNA (2283bp) protein (761aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium sp. CAG:277 RepID=R7K009_9CLOT
L3_114_360G1_scaffold_24_17
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18269..19165
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K055_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69604.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Small-conductance mechanosensitive channel
L3_114_360G1_scaffold_24_18
unknown

Not on your lists

19226..19318
DNA (93bp) protein (31aa)

This feature has no annotations

L3_114_360G1_scaffold_24_19
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19302..20243
DNA (942bp) protein (314aa)
Mg2+ and Co2+ transporter n=1 Tax=Roseburia sp. CAG:380 RepID=R6WGE5_9FIRM
Mg2+ and Co2+ transporter {ECO:0000313|EMBL:CDC93267.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Mg2+ and Co2+ transporter
L3_114_360G1_scaffold_24_20
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20238..21551)
DNA (1314bp) protein (438aa)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3K4_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CDE69602.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
amidohydrolase
L3_114_360G1_scaffold_24_21
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21615..22457)
DNA (843bp) protein (281aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Purine nucleoside phosphorylase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K121_9CLOT
inosine guanosine and xanthosine phosphorylase family protein
L3_114_360G1_scaffold_24_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22693..24639
DNA (1947bp) protein (649aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Clostridium sp. CAG:277 RepID=R7K004_9CLOT
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDE69600.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
diguanylate cyclase (GGDEF) domain
L3_114_360G1_scaffold_24_23
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24671..26593)
DNA (1923bp) protein (641aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Clostridium sp. CAG:277 RepID=R7K050_9CLOT
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDE69599.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_114_360G1_scaffold_24_24
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26852..29401
DNA (2550bp) protein (850aa)
methionine synthase (B12-dependent) (EC:2.1.1.13)
Vitamin B12-dependent methionine synthase family protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K183_9CLOT
Vitamin B12-dependent methionine synthase family protein {ECO:0000313|EMBL:CDE69598.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_360G1_scaffold_24_25
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29367..30425
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3J9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69597.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_114_360G1_scaffold_24_26
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30458..31285
DNA (828bp) protein (276aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K116_9CLOT
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:CDE69596.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_360G1_scaffold_24_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31316..32353)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69595.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_24_28
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32528..34045
DNA (1518bp) protein (506aa)
sialate O-acetylesterase (EC:3.1.1.53)
Sialate O-acetylesterase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K045_9CLOT
Sialate O-acetylesterase {ECO:0000313|EMBL:CDE69594.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_360G1_scaffold_24_29
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34145..34630
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. CAG:277 RepID=R7K177_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
greA; transcription elongation factor GreA
L3_114_360G1_scaffold_24_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34654..36156
DNA (1503bp) protein (501aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3J4_9CLOT
Displaying items 1-30 of 210 in total

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