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L3_114_360G1_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 166 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_25_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(175..645)
DNA (471bp) protein (157aa)
glyoxalase n=1 Tax=Desulfitobacterium hafniense RepID=UPI000374FFAE
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EXG87564.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_114_360G1_scaffold_25_2
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(649..1470)
DNA (822bp) protein (274aa)
AraC family transcriptional regulator n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003606F4B
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EXG87563.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_114_360G1_scaffold_25_3
unknown

Not on your lists

comp(2337..2972)
DNA (636bp) protein (212aa)

This feature has no annotations

L3_114_360G1_scaffold_25_4
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3750..4862)
DNA (1113bp) protein (371aa)
Endoglucanase n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A4B4_DESDJ
endoglucanase
Endoglucanase {ECO:0000313|EMBL:AFL98798.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L3_114_360G1_scaffold_25_5
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4859..6733)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GBN1_9BACL
Uncharacterized protein {ECO:0000313|EMBL:GAE06264.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
hypothetical protein
L3_114_360G1_scaffold_25_6
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6735..9041)
DNA (2307bp) protein (769aa)
bcsA; cellulose synthase catalytic subunit (EC:2.4.1.12)
Glutamate synthase n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9G8S2_9BACL
Glutamate synthase {ECO:0000313|EMBL:GAE06263.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
L3_114_360G1_scaffold_25_7
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9028..10128)
DNA (1101bp) protein (367aa)
dolichol-phosphate mannosyltransferase (EC:2.4.1.83)
Dolichol-phosphate mannosyltransferase n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9G8W1_9BACL
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:GAE06262.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
L3_114_360G1_scaffold_25_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10343..10615)
DNA (273bp) protein (91aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W6J4_DESOD
Transposase family protein {ECO:0000313|EMBL:AJH01420.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
spermidine/putrescine-binding periplasmic protein
L3_114_360G1_scaffold_25_9
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10834..11049)
DNA (216bp) protein (72aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W6J4_DESOD
spermidine/putrescine-binding periplasmic protein
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:AET68632.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_114_360G1_scaffold_25_10
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11175..11765)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY58_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY24710.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
L3_114_360G1_scaffold_25_11
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(11797..12318)
DNA (522bp) protein (174aa)
Histidine kinase n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QN32_NOSS7
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AFY46232.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
L3_114_360G1_scaffold_25_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12484..13353
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JN96_CLOBU
transposase IS4 family protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ32205.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_114_360G1_scaffold_25_13
unknown

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13459..13620
DNA (162bp) protein (54aa)

This feature has no annotations

L3_114_360G1_scaffold_25_14
unknown

Not on your lists

13928..14125
DNA (198bp) protein (66aa)

This feature has no annotations

L3_114_360G1_scaffold_25_15
unknown

Not on your lists

14154..14306
DNA (153bp) protein (51aa)

This feature has no annotations

L3_114_360G1_scaffold_25_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14599..16641)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IKX7_DESMD
ATP-dependent Lon protease {ECO:0000313|EMBL:KJS18836.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
L3_114_360G1_scaffold_25_17
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16730..19270)
DNA (2541bp) protein (847aa)
TIGR02687 family protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IUQ8_DESMD
Uncharacterized protein {ECO:0000313|EMBL:GAK43182.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
hypothetical protein
L3_114_360G1_scaffold_25_18
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19283..22744)
DNA (3462bp) protein (1154aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037AEBAB
Type II deoxyribonuclease {ECO:0000313|EMBL:ETA80432.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
type II deoxyribonuclease
L3_114_360G1_scaffold_25_19
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22754..26413)
DNA (3660bp) protein (1220aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7ITK7_DESMD
Uncharacterized protein {ECO:0000313|EMBL:GAK43179.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
hypothetical protein
L3_114_360G1_scaffold_25_20
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(26433..27014)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CDT6_9FIRM
protein of unknown function (DUF1788)
Uncharacterized protein {ECO:0000313|EMBL:CDA63442.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_114_360G1_scaffold_25_21
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27014..27616)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Johnsonella ignava ATCC 51276 RepID=G5GEU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:GAK43177.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
hypothetical protein
L3_114_360G1_scaffold_25_22
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27650..27841)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=G8LUY8_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN51759.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L3_114_360G1_scaffold_25_23
Anoxybacillus gonensis, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28204..29496
DNA (1293bp) protein (431aa)
recombinase n=1 Tax=Anoxybacillus kamchatkensis RepID=UPI0002DB7CD9
Recombinase {ECO:0000313|EMBL:KGP62086.1}; TaxID=198467 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus gonensis.;"
site-specific recombinase
L3_114_360G1_scaffold_25_24
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29501..30868)
DNA (1368bp) protein (456aa)
RNA methyltransferase, TrmA family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JP51_CELLD
RNA methyltransferase, TrmA family
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ADZ83665.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_25_25
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30879..31046)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JP50_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ83664.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_25_26
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31039..31584)
DNA (546bp) protein (182aa)
CRISPR-associated protein Cas4 n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JP49_CELLD
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ADZ83663.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_25_27
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31850..32782)
DNA (933bp) protein (311aa)
Metal dependent phosphohydrolase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JP47_CELLD
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADZ83661.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_25_28
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32931..34349)
DNA (1419bp) protein (473aa)
2-alkenal reductase (EC:1.3.1.74)
2-alkenal reductase {ECO:0000313|EMBL:ABP67586.1}; EC=1.3.1.74 {ECO:0000313|EMBL:ABP67586.1};; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
2-alkenal reductase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFEDE
L3_114_360G1_scaffold_25_29
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34505..35989)
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JP46_CELLD
integral membrane sensor signal transduction histidine kinase
L3_114_360G1_scaffold_25_30
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35941..36621)
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JP45_CELLD
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADZ83659.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Displaying items 1-30 of 166 in total

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