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L3_114_360G1_scaffold_46

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Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_46_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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702..1922
DNA (1221bp) protein (407aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KSE0_9FIRM
L3_114_360G1_scaffold_46_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2127..3068
DNA (942bp) protein (314aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJI6_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ89644.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_46_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3300..5000
DNA (1701bp) protein (567aa)
Putative dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K1S9_9FIRM
Putative dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ92481.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Ig-like domain-containing surface protein
L3_114_360G1_scaffold_46_4
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5152..5751
DNA (600bp) protein (200aa)
Putative superoxide reductase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N2J6_9CLOT
putative Xre family DNA-binding protein
Tax=BJP_IG2157_Clostridiales_52_13
L3_114_360G1_scaffold_46_5
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5837..6223)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LRA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89643.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_46_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6403..7689)
DNA (1287bp) protein (429aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KBL4_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ERJ89642.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_46_7
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8609..10453
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FDH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE12910.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
L3_114_360G1_scaffold_46_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10556..12520
DNA (1965bp) protein (655aa)
DHHA1 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LRH5_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:ERJ89728.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
L3_114_360G1_scaffold_46_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12592..13038
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KBT9_9FIRM
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
LSU ribosomal protein L9P
L3_114_360G1_scaffold_46_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13310..14659
DNA (1350bp) protein (450aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JTY4_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:ERJ89736.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_46_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14649..16001
DNA (1353bp) protein (451aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KC96_9FIRM
L3_114_360G1_scaffold_46_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16064..18028
DNA (1965bp) protein (655aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJQ9_9FIRM
L3_114_360G1_scaffold_46_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18173..20539
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KX75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96897.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Listeria/Bacterioides repeat
L3_114_360G1_scaffold_46_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20706..21200
DNA (495bp) protein (165aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteinase LuxS n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KCB3_9FIRM
L3_114_360G1_scaffold_46_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21216..23078
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JU03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ89756.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_46_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23240..25093
DNA (1854bp) protein (618aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KBX1_9FIRM
L3_114_360G1_scaffold_46_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25172..27007)
DNA (1836bp) protein (612aa)
Asparagine synthetase (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LJS7_9FIRM
Asparagine synthase {ECO:0000313|EMBL:ERJ89754.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
asparagine synthase
L3_114_360G1_scaffold_46_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27166..30561)
DNA (3396bp) protein (1132aa)
Ricin-type beta-trefoil lectin domain protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4T5_9FIRM
Ricin-type beta-trefoil lectin domain protein {ECO:0000313|EMBL:ERJ96754.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Dockerin type I repeat./Ricin-type beta-trefoil lectin domain.
L3_114_360G1_scaffold_46_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30866..31315)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96757.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_46_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31698..33140
DNA (1443bp) protein (481aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JY00_9FIRM
L3_114_360G1_scaffold_46_21
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33155..34141
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FF68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE12337.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
glycosyltransferase
L3_114_360G1_scaffold_46_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34229..34822)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KFY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91157.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_46_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35043..35513
DNA (471bp) protein (157aa)
Transcriptional regulator SlyA domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LNR4_9FIRM
Transcriptional regulator SlyA domain protein {ECO:0000313|EMBL:ERJ91129.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
MarR family transcriptional regulator
L3_114_360G1_scaffold_46_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35510..37243
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KGA7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ91130.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
multidrug ABC transporter ATPase/permease
L3_114_360G1_scaffold_46_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37240..39150
DNA (1911bp) protein (637aa)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JXX9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ91131.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ABC-type multidrug transport system, ATPase and permease components
L3_114_360G1_scaffold_46_26
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39491..40741
DNA (1251bp) protein (417aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7F8R0_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDE11684.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
L3_114_360G1_scaffold_46_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40758..42023
DNA (1266bp) protein (422aa)
CAAX amino terminal protease family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KFX3_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ERJ91147.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
CAAX amino terminal protease family.
L3_114_360G1_scaffold_46_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42181..43377
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JXZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91146.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Ig-like domain-containing surface protein
L3_114_360G1_scaffold_46_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43826..44497
DNA (672bp) protein (224aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cysE; Serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KFW8_9FIRM
L3_114_360G1_scaffold_46_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44513..45157
DNA (645bp) protein (215aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JXY7_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERJ91141.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Displaying items 1-30 of 129 in total

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