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L3_114_360G1_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_66_1
unknown

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2..619
DNA (618bp) protein (206aa)

This feature has no annotations

L3_114_360G1_scaffold_66_2
unknown

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comp(839..1063)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_114_360G1_scaffold_66_3
unknown

Not on your lists

comp(1314..1586)
DNA (273bp) protein (91aa)

This feature has no annotations

L3_114_360G1_scaffold_66_4
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2753..3043)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7F9K3_9FIRM
CRISPR-associated protein Cas2
L3_114_360G1_scaffold_66_5
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3050..4078)
DNA (1029bp) protein (343aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FBY9_9FIRM
CRISPR-associated protein Cas1
L3_114_360G1_scaffold_66_6
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4086..4748)
DNA (663bp) protein (221aa)
CRISPR-associated protein Cas4 n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FE55_9FIRM
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:CDE11997.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
CRISPR-associated protein Cas4
L3_114_360G1_scaffold_66_7
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4755..5615)
DNA (861bp) protein (287aa)
CRISPR-associated protein Csd2 family n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FBF3_9FIRM
CRISPR-associated protein Csd2 family {ECO:0000313|EMBL:CDE11996.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
protein Csd2 family protein
L3_114_360G1_scaffold_66_8
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5619..7550)
DNA (1932bp) protein (644aa)
CRISPR-associated protein Csd1 family n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FAX0_9FIRM
CRISPR-associated protein Csd1 family {ECO:0000313|EMBL:CDE11995.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
Csd1 family CRISPR-associated protein
L3_114_360G1_scaffold_66_9
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7534..8286)
DNA (753bp) protein (251aa)
CRISPR-associated protein cas5 dvulg subtype n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7F9K0_9FIRM
CRISPR-associated protein cas5 dvulg subtype {ECO:0000313|EMBL:CDE11994.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
Cas5 family CRISPR-associated protein
L3_114_360G1_scaffold_66_10
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8450..10903)
DNA (2454bp) protein (818aa)
Metal dependent phosphohydrolase n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FBY4_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDE11993.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
metal dependent phosphohydrolase
L3_114_360G1_scaffold_66_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11371..12855
DNA (1485bp) protein (495aa)
Glycosyl hydrolase, family 43 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LY49_9FIRM
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:ERJ94419.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
xylA; XylA
L3_114_360G1_scaffold_66_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12871..14370
DNA (1500bp) protein (500aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10 2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQQ9_9FIRM
L3_114_360G1_scaffold_66_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14450..15619)
DNA (1170bp) protein (390aa)
Cation diffusion facilitator family transporter n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4A6_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ERJ94158.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cation diffusion facilitator family transporter
L3_114_360G1_scaffold_66_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16073..16846
DNA (774bp) protein (258aa)
LytTr DNA-binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQ11_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ERJ94160.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Response regulator of the LytR/AlgR family
L3_114_360G1_scaffold_66_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16851..18116
DNA (1266bp) protein (422aa)
Putative flagellar protein FliS n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K6Q2_9FIRM
Putative flagellar protein FliS {ECO:0000313|EMBL:ERJ94161.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
putative sensor histidine kinase
L3_114_360G1_scaffold_66_16
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18161..18991)
DNA (831bp) protein (277aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FEB2_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE13644.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
transcriptional regulator, AraC family
L3_114_360G1_scaffold_66_17
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19180..20655)
DNA (1476bp) protein (492aa)
Amino acid transporter n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FFL3_9FIRM
Amino acid transporter {ECO:0000313|EMBL:CDE13645.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
PotE; amino acid transporter
L3_114_360G1_scaffold_66_18
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20686..21048)
DNA (363bp) protein (121aa)
Nitrogen regulatory protein PII n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FG37_9FIRM
Nitrogen regulatory protein PII {ECO:0000313|EMBL:CDE13646.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
L3_114_360G1_scaffold_66_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21189..22301)
DNA (1113bp) protein (371aa)
glycine/D-amino acid oxidase (EC:1.5.3.1)
FAD dependent oxidoreductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M4B6_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:ERJ96579.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_66_20
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22298..22618)
DNA (321bp) protein (107aa)
[2Fe-2S]-binding domain protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FGL5_9FIRM
[2Fe-2S]-binding domain protein {ECO:0000313|EMBL:CDE13648.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
NAD(P)H-nitrite reductase
L3_114_360G1_scaffold_66_21
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22615..24204)
DNA (1590bp) protein (530aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FEB9_9FIRM
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:CDE13649.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_114_360G1_scaffold_66_22
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24201..24527)
DNA (327bp) protein (109aa)
Uncharacterized NAD-dependent dehydrogenase n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FFM0_9FIRM
Uncharacterized NAD-dependent dehydrogenase {ECO:0000313|EMBL:CDE13650.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
HcaD; NAD-dependent dehydrogenase
L3_114_360G1_scaffold_66_23
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24548..25777)
DNA (1230bp) protein (410aa)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FG45_9FIRM
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:CDE13651.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
ornithine cyclodeaminase, mu-crystallin
L3_114_360G1_scaffold_66_24
unknown

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comp(25843..26634)
DNA (792bp) protein (264aa)

This feature has no annotations

L3_114_360G1_scaffold_66_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26659..27807)
DNA (1149bp) protein (383aa)
fucO; lactaldehyde reductase FucO (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWY6_9FIRM
Lactaldehyde reductase {ECO:0000313|EMBL:ERJ96585.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_66_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27932..28399)
DNA (468bp) protein (156aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3J0_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY98510.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_114_360G1_scaffold_66_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28447..29346)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MBC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96588.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_66_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29582..31000)
DNA (1419bp) protein (473aa)
Amino acid carrier protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JR93_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:ERJ88791.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
amino acid carrier protein
L3_114_360G1_scaffold_66_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31284..31781)
DNA (498bp) protein (166aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LNS7_9FIRM
L3_114_360G1_scaffold_66_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31783..32469)
DNA (687bp) protein (229aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LH44_9FIRM
preQ(0) biosynthesis protein QueC
Displaying items 1-30 of 116 in total

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