ggKbase home page

L3_114_360G1_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_70_1
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..3078)
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K036_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69584.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
autotransporter-associated beta strand repeat-containing protein
L3_114_360G1_scaffold_70_2
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3510..3704)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K536_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70122.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_70_3
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3739..4938)
DNA (1200bp) protein (400aa)
Sodium/glutamate symporter n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2Q7_9CLOT
Sodium/glutamate symporter {ECO:0000313|EMBL:CDE70123.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
glutamate:Na+ symporter, ESS family
L3_114_360G1_scaffold_70_4
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5047..6006)
DNA (960bp) protein (320aa)
Immunogenic protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1L0_9CLOT
Immunogenic protein {ECO:0000313|EMBL:CDE70124.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
TRAP transporter solute receptor, TAXI family
L3_114_360G1_scaffold_70_5
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6032..7345)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70125.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Predicted membrane protein
L3_114_360G1_scaffold_70_6
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7565..8461)
DNA (897bp) protein (299aa)
Phosphate ABC transporter n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2L4_9CLOT
Phosphate ABC transporter {ECO:0000313|EMBL:CDE70126.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L3_114_360G1_scaffold_70_7
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8593..9501)
DNA (909bp) protein (303aa)
Phosphate ABC transporter substrate-binding protein PhoT family (TC 3.A.1.7.1) n=1 Tax=Clostridium sp. CAG:277 RepID=R7K541_9CLOT
Phosphate ABC transporter substrate-binding protein PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CDE70127.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_114_360G1_scaffold_70_8
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9710..10345)
DNA (636bp) protein (212aa)
Siroheme synthase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2R2_9CLOT
Siroheme synthase {ECO:0000313|EMBL:CDE70128.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
siroheme synthase, N-terminal domain
L3_114_360G1_scaffold_70_9
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10384..11313)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70129.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_70_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11412..12728)
DNA (1317bp) protein (439aa)
Stage IV sporulation protein B n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1G6_9CLOT
Stage IV sporulation protein B {ECO:0000313|EMBL:CDE70130.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
stage IV sporulation protein B
L3_114_360G1_scaffold_70_11
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12950..14689)
DNA (1740bp) protein (580aa)
DNA repair protein RecN n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2L8_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
DNA repair protein RecN
L3_114_360G1_scaffold_70_12
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14747..19702)
DNA (4956bp) protein (1652aa)
Ig domain protein group 2 domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K548_9CLOT
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CDE70132.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_70_13
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19741..20484)
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein BN584_01514 n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2R6_9CLOT
Probable transcriptional regulatory protein BN584_01514 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
conserved hypothetical protein TIGR01033
L3_114_360G1_scaffold_70_14
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20608..21477)
DNA (870bp) protein (290aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1L9_9CLOT
L3_114_360G1_scaffold_70_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21474..22328)
DNA (855bp) protein (285aa)
Hemolysin A n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1G9_9CLOT
Hemolysin A {ECO:0000313|EMBL:CDE70135.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hemolysin A
L3_114_360G1_scaffold_70_16
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22337..24214)
DNA (1878bp) protein (626aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2M3_9CLOT
deoxyxylulose-5-phosphate synthase
L3_114_360G1_scaffold_70_17
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24246..25142)
DNA (897bp) protein (299aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K555_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70137.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_360G1_scaffold_70_18
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25215..25409)
DNA (195bp) protein (65aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2S2_9CLOT
Exonuclease VII small subunit
L3_114_360G1_scaffold_70_19
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25412..26623)
DNA (1212bp) protein (404aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1M3_9CLOT
L3_114_360G1_scaffold_70_20
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26626..27069)
DNA (444bp) protein (148aa)
N utilization substance protein B homolog n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1H4_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
transcription antitermination factor NusB
L3_114_360G1_scaffold_70_21
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27093..27473)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2M7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70141.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_70_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27573..28292)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K560_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70142.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_70_23
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28327..28974)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70143.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_70_24
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28950..29567)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1M8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70144.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_114_360G1_scaffold_70_25
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29626..30702)
DNA (1077bp) protein (359aa)
Sporulation stage III protein AE n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1I0_9CLOT
Sporulation stage III protein AE {ECO:0000313|EMBL:CDE70145.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
sporulation stage III, protein AE
L3_114_360G1_scaffold_70_26
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30725..31117)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70146.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
stage III sporulation protein AD
L3_114_360G1_scaffold_70_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31151..31345)
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=1 Tax=Clostridium sp. CAG:277 RepID=R7K566_9CLOT
Stage III sporulation protein AC {ECO:0000313|EMBL:CDE70147.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
stage III sporulation protein AC
L3_114_360G1_scaffold_70_28
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31366..31899)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K2T2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70148.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_114_360G1_scaffold_70_29
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31896..32957)
DNA (1062bp) protein (354aa)
Stage III sporulation protein AA n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1N1_9CLOT
Stage III sporulation protein AA {ECO:0000313|EMBL:CDE70149.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
stage III sporulation protein AA
L3_114_360G1_scaffold_70_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33083..34573
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1I4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70150.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
Displaying items 1-30 of 113 in total

View Taxonomy