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L3_114_360G1_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_93_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..521
DNA (519bp) protein (173aa)
Carboxymuconolactone decarboxylase family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KG31_9FIRM
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:ERJ91040.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L3_114_360G1_scaffold_93_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

518..991
DNA (474bp) protein (158aa)
Uncharacterized protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LNT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ91149.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Flavodoxins
L3_114_360G1_scaffold_93_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1191..2177)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JJZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86566.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_93_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2285..2509)
DNA (225bp) protein (75aa)
Dockerin type I repeat-containing domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K2V4_9FIRM
Dockerin type I repeat-containing domain protein {ECO:0000313|EMBL:ERJ86567.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_93_5
Pelodiscus sinensis, Pelodiscus, Testudines, Chordata, Metazoa

Not on your lists

2565..4442
DNA (1878bp) protein (626aa)
Ribokinase (EC:2.7.1.15)
Uncharacterized protein n=1 Tax=Pelodiscus sinensis RepID=K7GCV5_PELSI
Uncharacterized protein {ECO:0000313|Ensembl:ENSPSIP00000018116}; TaxID=13735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus.;" source="Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).;"
L3_114_360G1_scaffold_93_6
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5239..6258)
DNA (1020bp) protein (340aa)
Putative Mbl protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JN86_9FIRM
Putative Mbl protein {ECO:0000313|EMBL:ERJ87721.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
rod shape-determining protein MreB
L3_114_360G1_scaffold_93_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6255..8549)
DNA (2295bp) protein (765aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K6J4_9FIRM
L3_114_360G1_scaffold_93_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8584..8961)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LE19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87719.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_93_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9048..9542)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LKS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87718.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_93_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9607..10221)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K6J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87715.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cytidylate kinase
L3_114_360G1_scaffold_93_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10589..10720
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LE15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87714.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_93_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10782..12080
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86608.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_93_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12365..12799
DNA (435bp) protein (145aa)
Hsp20/alpha crystallin family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K619_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:ERJ87722.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hsp20; Heat shock protein Hsp20
L3_114_360G1_scaffold_93_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12955..13392
DNA (438bp) protein (146aa)
Hsp20/alpha crystallin family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LKT0_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:ERJ87723.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hsp20; Heat shock protein Hsp20
L3_114_360G1_scaffold_93_15
unknown

Not on your lists

comp(13418..13519)
DNA (102bp) protein (34aa)

This feature has no annotations

L3_114_360G1_scaffold_93_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13990..15384
DNA (1395bp) protein (465aa)
DNA repair protein radA n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K2Y6_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
DNA repair protein RadA
L3_114_360G1_scaffold_93_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15478..16389
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86608.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_93_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16402..17517
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86608.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_93_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17530..18777
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LHQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ86608.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
S-layer domain-containing protein
L3_114_360G1_scaffold_93_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18924..19397
DNA (474bp) protein (158aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JN77_9FIRM
L3_114_360G1_scaffold_93_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19406..19948
DNA (543bp) protein (181aa)
Transcriptional regulator, Fur family (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JNB4_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:ERJ87751.1}; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Fe2+/Zn2+ uptake regulation proteins
L3_114_360G1_scaffold_93_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20131..20301)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K6M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87750.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_93_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20313..20744)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LE43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87749.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_93_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20858..21379
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LKV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87748.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_93_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21415..21777)
DNA (363bp) protein (121aa)
GIY-YIG catalytic domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K644_9FIRM
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:ERJ87747.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
endonuclease containing a URI domain protein
L3_114_360G1_scaffold_93_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22025..23566
DNA (1542bp) protein (514aa)
Chain length determinant protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K6L9_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:ERJ87745.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_93_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23713..24261)
DNA (549bp) protein (183aa)
Rubredoxin n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K600_9FIRM
Rubredoxin {ECO:0000313|EMBL:ERJ93931.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Rubrerythrin
L3_114_360G1_scaffold_93_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24559..26769
DNA (2211bp) protein (737aa)
Sel1 repeat protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3Q6_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:ERJ93968.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_93_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27400..27888)
DNA (489bp) protein (163aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNW4_9FIRM
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:ERJ93967.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_93_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27955..28659)
DNA (705bp) protein (235aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KPG9_9FIRM
Displaying items 1-30 of 105 in total

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