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L3_114_360G1_scaffold_199

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_199_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96..779)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CME8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79125.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_360G1_scaffold_199_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(786..1502)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9U5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78238.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
probable selenium-dependent hydroxylase accessory protein YqeC
L3_114_360G1_scaffold_199_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1462..2340)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79130.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
selenium-dependent molybdenum hydroxylase system protein, YqeB family
L3_114_360G1_scaffold_199_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2337..2837)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79131.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
L3_114_360G1_scaffold_199_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2834..3718)
DNA (885bp) protein (295aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs (EC:1.17.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79132.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_360G1_scaffold_199_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3734..6007)
DNA (2274bp) protein (758aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78242.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_360G1_scaffold_199_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6347..6838)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78243.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
4Fe-4S binding domain.
L3_114_360G1_scaffold_199_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6841..9423)
DNA (2583bp) protein (861aa)
selenium-dependent molybdenum hydroxylase 1 (EC:1.17.1.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76765.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_360G1_scaffold_199_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9805..12804)
DNA (3000bp) protein (1000aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78245.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
selenate reductase YgfK
L3_114_360G1_scaffold_199_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12908..14239)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78246.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative selenium metabolism protein SsnA
L3_114_360G1_scaffold_199_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14547..15146)
DNA (600bp) protein (200aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73)
Alpha-ribazole-5'-phosphate phosphatase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIH0_9FIRM
Alpha-ribazole-5'-phosphate phosphatase {ECO:0000313|EMBL:CDD77816.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_360G1_scaffold_199_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15139..15519)
DNA (381bp) protein (127aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase (EC:2.7.7.62 2.7.1.156)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77818.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_360G1_scaffold_199_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15530..16306)
DNA (777bp) protein (259aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=2 Tax=Ruminococcus RepID=C6J9V6_9FIRM
L3_114_360G1_scaffold_199_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16352..16894)
DNA (543bp) protein (181aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77822.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_360G1_scaffold_199_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16894..17946)
DNA (1053bp) protein (351aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHZ5_9FIRM
L3_114_360G1_scaffold_199_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17971..18387)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78252.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted membrane protein
L3_114_360G1_scaffold_199_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18401..19336)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77828.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Glycosyltransferases involved in cell wall biogenesis
L3_114_360G1_scaffold_199_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19647..22382)
DNA (2736bp) protein (912aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77830.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein
L3_114_360G1_scaffold_199_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22888..26424)
DNA (3537bp) protein (1179aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9W2_9FIRM
L3_114_360G1_scaffold_199_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26699..27106)
DNA (408bp) protein (136aa)
Rrf2 family protein n=2 Tax=Ruminococcus RepID=C6J9W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78471.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
rrf2 family protein (putative transcriptional regulator)
L3_114_360G1_scaffold_199_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27458..29098
DNA (1641bp) protein (547aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78473.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_114_360G1_scaffold_199_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29140..29658)
DNA (519bp) protein (173aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=Ruminococcus RepID=C6J9W5_9FIRM
ybaK/ebsC protein
L3_114_360G1_scaffold_199_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29609..30385)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78259.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_360G1_scaffold_199_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30573..31751)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78476.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transglutaminase-like superfamily.
L3_114_360G1_scaffold_199_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32094..32732
DNA (639bp) protein (213aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphate propanoyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9W8_9FIRM
propanediol utilization protein
L3_114_360G1_scaffold_199_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32817..33683)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D8CBF7
Uncharacterized protein {ECO:0000313|EMBL:EES76730.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_360G1_scaffold_199_27
unknown

Not on your lists

comp(33742..33936)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00037D04C7
L3_114_360G1_scaffold_199_28
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(34120..35544)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031E8634
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDA15262.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
response regulator PleD
L3_114_360G1_scaffold_199_29
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35728..38442
DNA (2715bp) protein (905aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F99FAC
Uncharacterized protein {ECO:0000313|EMBL:CCX75125.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Signal transduction histidine kinase
L3_114_360G1_scaffold_199_30
unknown

Not on your lists

38568..38993
DNA (426bp) protein (142aa)

This feature has no annotations

Displaying items 1-30 of 63 in total

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