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L3_114_360G1_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_204_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

103..930
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=21 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CN22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO18781.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transposase mutator type
L3_114_360G1_scaffold_204_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

953..1531
DNA (579bp) protein (193aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI77_9FIRM
TnpX site-specific recombinase family protein {ECO:0000313|EMBL:EHM52861.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_114_360G1_scaffold_204_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1588..2781)
DNA (1194bp) protein (398aa)
Glycosyltransferase, MGT family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMW7_9FIRM
Glycosyltransferase, MGT family {ECO:0000313|EMBL:EHM53822.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
oleandomycin glycosyltransferase
L3_114_360G1_scaffold_204_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2887..3105)
DNA (219bp) protein (73aa)
Transcriptional regulator, AbrB family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BLX2_9CLOT
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ERI72803.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
AbrB family transcriptional regulator
L3_114_360G1_scaffold_204_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3237..4589
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CH63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56583.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transcriptional regulator containing PAS
L3_114_360G1_scaffold_204_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4853..6247
DNA (1395bp) protein (465aa)
Citrate transporter n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CH62_9FIRM
Citrate transporter {ECO:0000313|EMBL:EHO31596.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
CitM; H+/citrate symporter
L3_114_360G1_scaffold_204_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6300..7646
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BKL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72765.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_114_360G1_scaffold_204_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7674..7973
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YMX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31594.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_114_360G1_scaffold_204_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8032..9531)
DNA (1500bp) protein (500aa)
Peptidase propeptide and YPEB domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4A7_9CLOT
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:ERI78883.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_114_360G1_scaffold_204_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9528..10109)
DNA (582bp) protein (194aa)
RNA polymerase sigma factor n=2 Tax=Clostridiales RepID=G9YRE4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
RNA polymerase sigma factor, sigma-70 family
L3_114_360G1_scaffold_204_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10362..11921)
DNA (1560bp) protein (520aa)
Resolvase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DH11_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI78886.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
resolvase family site-specific recombinase
L3_114_360G1_scaffold_204_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12168..12596)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78888.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_114_360G1_scaffold_204_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12589..13497)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78889.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_114_360G1_scaffold_204_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13556..14065)
DNA (510bp) protein (170aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Clostridiales RepID=G9YSS3_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ERI78890.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_114_360G1_scaffold_204_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14139..14387)
DNA (249bp) protein (83aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YSS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30383.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative Xre family DNA-binding protein
L3_114_360G1_scaffold_204_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14741..15115
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30384.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L3_114_360G1_scaffold_204_17
unknown

Not on your lists

15296..15604
DNA (309bp) protein (103aa)

This feature has no annotations

L3_114_360G1_scaffold_204_18
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15678..17342)
DNA (1665bp) protein (555aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUJ3_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDO60643.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
resolvase
L3_114_360G1_scaffold_204_19
unknown

Not on your lists

comp(17329..17523)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_114_360G1_scaffold_204_20
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18015..18449)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0J9A5_9FIRM
RNA polymerase sigma24 factor
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KJS20001.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
L3_114_360G1_scaffold_204_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19176..19523
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZBS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17929.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
helix-turn-helix domain-containing protein
L3_114_360G1_scaffold_204_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19594..20103
DNA (510bp) protein (170aa)
Sigma-70 region 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53972.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_114_360G1_scaffold_204_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20149..21060
DNA (912bp) protein (304aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YLJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI65793.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_114_360G1_scaffold_204_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21067..21504
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54740.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_114_360G1_scaffold_204_25
unknown

Not on your lists

21698..22612
DNA (915bp) protein (305aa)

This feature has no annotations

L3_114_360G1_scaffold_204_26
unknown

Not on your lists

comp(23040..23144)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_114_360G1_scaffold_204_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23144..24058)
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RT07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66353.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_114_360G1_scaffold_204_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24077..25237)
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54223.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_114_360G1_scaffold_204_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25241..27595)
DNA (2355bp) protein (785aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QKE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66352.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
TraE family protein
L3_114_360G1_scaffold_204_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27592..27933)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q1Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66351.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
Displaying items 1-30 of 70 in total

View Taxonomy