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L3_114_360G1_scaffold_210

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_210_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(255..1286)
DNA (1032bp) protein (344aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K8E8_9FIRM
L3_114_360G1_scaffold_210_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1356..2486)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94785.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_210_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2483..2929)
DNA (447bp) protein (149aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LZ63_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ERJ94784.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_210_4
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2913..5504)
DNA (2592bp) protein (864aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M625_9FIRM
L3_114_360G1_scaffold_210_5
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6180..6464)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H469_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33007.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
L3_114_360G1_scaffold_210_6
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6483..6815)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6XVF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD10262.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
hypothetical protein
L3_114_360G1_scaffold_210_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6976..7995)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94790.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_210_8
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8016..8708)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LZ68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94789.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_210_9
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8970..10316
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRE1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERJ94857.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
MATE efflux family protein
L3_114_360G1_scaffold_210_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10398..10997
DNA (600bp) protein (200aa)
Phosphoserine phosphatase/homoserine phosphotransferase protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K8K7_9FIRM
Phosphoserine phosphatase/homoserine phosphotransferase protein {ECO:0000313|EMBL:ERJ94846.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
thrH; phosphoserine phosphatase
L3_114_360G1_scaffold_210_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11010..11267
DNA (258bp) protein (86aa)
Acetyltransferase, GNAT family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KRY0_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERJ94845.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
GNAT family acetyltransferase
L3_114_360G1_scaffold_210_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11273..11596
DNA (324bp) protein (108aa)
Cupin domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LZC0_9FIRM
Cupin domain protein {ECO:0000313|EMBL:ERJ94844.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cupin domain protein
L3_114_360G1_scaffold_210_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11682..12446)
DNA (765bp) protein (255aa)
ThiF family protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M6A4_9FIRM
ThiF family protein {ECO:0000313|EMBL:ERJ94858.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_114_360G1_scaffold_210_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12447..13640)
DNA (1194bp) protein (398aa)
cystathionine gamma-synthase (EC:2.5.1.48 4.4.1.1)
Putative cystathionine beta-lyase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LZD3_9FIRM
Putative cystathionine beta-lyase {ECO:0000313|EMBL:ERJ94859.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_210_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13878..16277
DNA (2400bp) protein (800aa)
M6 family metalloprotease domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LRW0_9FIRM
M6 family metalloprotease domain protein {ECO:0000313|EMBL:ERJ92199.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
protease
L3_114_360G1_scaffold_210_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16281..17264
DNA (984bp) protein (328aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LYN0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERJ92198.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
AraC-type DNA-binding domain-containing proteins
L3_114_360G1_scaffold_210_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17431..20484)
DNA (3054bp) protein (1018aa)
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Carbohydrate binding domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K104_9FIRM
Beta-glucanase/Beta-glucan synthetase
L3_114_360G1_scaffold_210_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20734..21705)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LYU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ92268.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_210_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21798..23000)
DNA (1203bp) protein (401aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Peptidase, S41 family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KJ02_9FIRM
Peptidase, S41 family {ECO:0000313|EMBL:ERJ92267.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_210_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23080..24573)
DNA (1494bp) protein (498aa)
Peptidase, M23 family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K171_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:ERJ92266.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
putative endopeptidase, family M23
L3_114_360G1_scaffold_210_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24605..25510)
DNA (906bp) protein (302aa)
Cell division protein FtsX n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KJM7_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Cell division protein
L3_114_360G1_scaffold_210_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25500..26189)
DNA (690bp) protein (230aa)
ftsE; cell division ATP-binding protein FtsE (EC:3.6.3.-)
Cell division ATP-binding protein FtsE n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LS21_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:ERJ92264.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_210_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26410..27459)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KIZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ92262.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
transcriptional regulator, CdaR family
L3_114_360G1_scaffold_210_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27734..29425)
DNA (1692bp) protein (564aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K166_9FIRM
L3_114_360G1_scaffold_210_25
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29429..29869)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KJM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ92260.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Domain of unknown function (DUF1934).
L3_114_360G1_scaffold_210_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29898..30737)
DNA (840bp) protein (280aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
murI; Glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LS18_9FIRM
L3_114_360G1_scaffold_210_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30768..32081)
DNA (1314bp) protein (438aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LYT6_9FIRM
L3_114_360G1_scaffold_210_28
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


32336..32485
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V0S7_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
LSU ribosomal protein L33P
L3_114_360G1_scaffold_210_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32501..32815
DNA (315bp) protein (105aa)
Protein translocase subunit SecE n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KJL9_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
preprotein translocase, SecE subunit, bacterial
L3_114_360G1_scaffold_210_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32846..33373
DNA (528bp) protein (176aa)
Transcription termination/antitermination protein NusG n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LS14_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
transcription antitermination protein nusG
Displaying items 1-30 of 77 in total

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