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L3_114_360G1_scaffold_228

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Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_228_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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93..1070
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D42F8
Uncharacterized protein {ECO:0000313|EMBL:KJC47396.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
L3_114_360G1_scaffold_228_2
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1903..2598
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DWE7_CLOS4
Response regulator receiver domain protein {ECO:0000313|EMBL:ERJ00829.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_114_360G1_scaffold_228_3
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2648..3619
DNA (972bp) protein (324aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F140_CLOS4
Signal transduction histidine kinase
L3_114_360G1_scaffold_228_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3681..6071
DNA (2391bp) protein (797aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z578_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65127.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
permease
L3_114_360G1_scaffold_228_5

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6088..6789
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W054_9CLOT
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:EKC63816.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_114_360G1_scaffold_228_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6879..7235
DNA (357bp) protein (119aa)
heat-shock protein Hsp90 n=1 Tax=Blautia producta RepID=UPI000382EC9A
Uncharacterized protein {ECO:0000313|EMBL:EDP13545.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_114_360G1_scaffold_228_7
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7568..8263
DNA (696bp) protein (232aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036A9EBE
ribose 5-phosphate isomerase
L3_114_360G1_scaffold_228_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8293..9270
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037AD464
Uncharacterized protein {ECO:0000313|EMBL:EGN31561.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
pgl; 6-phosphogluconolactonase
L3_114_360G1_scaffold_228_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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9282..10712
DNA (1431bp) protein (477aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase n=1 Tax=Blautia producta RepID=UPI00037B3510
L3_114_360G1_scaffold_228_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10705..12102
DNA (1398bp) protein (466aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
glucose 6-phosphate dehydrogenase n=1 Tax=Blautia producta RepID=UPI00037DE185
L3_114_360G1_scaffold_228_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12167..13912)
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037965E7
Uncharacterized protein {ECO:0000313|EMBL:ERI71577.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_114_360G1_scaffold_228_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14067..14513
DNA (447bp) protein (149aa)
transcriptional regulator n=1 Tax=Blautia producta RepID=UPI00036EA047
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEG72487.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
transcriptional regulator
L3_114_360G1_scaffold_228_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14623..14751
DNA (129bp) protein (43aa)
DNA-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YZB5_9CLOT
DNA-binding protein {ECO:0000313|EMBL:EGB92770.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
XRE family transcriptional regulator
L3_114_360G1_scaffold_228_14
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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15101..15691
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K084_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39748.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
TetR family transcriptional regulator
L3_114_360G1_scaffold_228_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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15845..16903
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B403D1
amidohydrolase 2
Tax=BJP_IG2103_Bacteroidetes_41_9
L3_114_360G1_scaffold_228_16
Enterococcus cecorum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17002..17403
DNA (402bp) protein (134aa)
Transcriptional regulatory family protein n=1 Tax=Clostridium difficile DA00167 RepID=T3R0F4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ESK61818.1}; TaxID=1121864 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus cecorum DSM 20682 = ATCC 43198.;"
putative transcriptional regulatorTn916-like,CTn7-Orf11
L3_114_360G1_scaffold_228_17
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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17454..17891
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KSK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49206.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
walR1; transcriptional regulatory protein WalR
L3_114_360G1_scaffold_228_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18390..18803
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P38 RepID=T4Q3R7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGN44071.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_114_360G1_scaffold_228_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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18876..20066
DNA (1191bp) protein (397aa)
DNA-binding helix-turn-helix protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SHQ3_9FIRM
Cro/CI family Transcriptional regulator {ECO:0000313|EMBL:EFV19379.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
helix-turn-helix protein
L3_114_360G1_scaffold_228_20
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20811..22433
DNA (1623bp) protein (541aa)
Resolvase, N terminal domain protein n=1 Tax=Clostridium difficile 824 RepID=T3II89_CLODI
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFE14232.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
resolvase family site-specific recombinase
L3_114_360G1_scaffold_228_21
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22503..23303
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Bacillus cereus R309803 RepID=C2Q848_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EEK80262.1}; TaxID=526968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus R309803.;"
hypothetical protein
L3_114_360G1_scaffold_228_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23290..23493
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AXD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEA80983.1}; Flags: Fragment;; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
tndX; conjugative transposon site-specific recombinase
L3_114_360G1_scaffold_228_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23538..23909
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003609351
DNA-binding protein {ECO:0000313|EMBL:EGB92770.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L3_114_360G1_scaffold_228_24
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24033..24542
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003780701
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABX41472.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_114_360G1_scaffold_228_25
R_RIF_OP11_03_48_12, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

24532..25200
DNA (669bp) protein (223aa)
signal peptidase I, bacterial type (EC:3.4.21.89)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003712FD6
Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_03_48_12_curated
L3_114_360G1_scaffold_228_26
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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25210..26034
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000360ED37
ABC transporter {ECO:0000313|EMBL:CDC37981.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
ABC transporter
L3_114_360G1_scaffold_228_27
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26021..26749
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000379C38F
Uncharacterized protein {ECO:0000313|EMBL:EDR96324.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
ABC transporter permease
L3_114_360G1_scaffold_228_28
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26770..27300
DNA (531bp) protein (177aa)
Riboflavin biosynthesis protein RibD protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BC99_9CLOT
Riboflavin biosynthesis protein RibD protein {ECO:0000313|EMBL:ERI69820.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
riboflavin biosynthesis protein RibD protein
L3_114_360G1_scaffold_228_29
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27328..27888
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037811EA
Uncharacterized protein {ECO:0000313|EMBL:EEG72597.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L3_114_360G1_scaffold_228_30
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28018..28737
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003632AB5
Branched-chain amino acid transporter AzlC {ECO:0000313|EMBL:EOS81616.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
branched-chain amino acid transporter AzlC
Displaying items 1-30 of 75 in total

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