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L3_114_360G1_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_241_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FKI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF02470.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_360G1_scaffold_241_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(112..1788)
DNA (1677bp) protein (559aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06453.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
methyl-accepting chemotaxis sensory transducer
L3_114_360G1_scaffold_241_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2015..2218
DNA (204bp) protein (68aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SQW2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94135.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_114_360G1_scaffold_241_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2412..3674)
DNA (1263bp) protein (421aa)
GroES-like protein n=3 Tax=Clostridium RepID=E9SQW3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06455.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
alcohol dehydrogenase
L3_114_360G1_scaffold_241_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3735..4208)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GM70_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94133.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
L3_114_360G1_scaffold_241_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4524..6623)
DNA (2100bp) protein (700aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
PRD domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C4W4_CLOSY
PRD domain protein {ECO:0000313|EMBL:ERI79570.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_241_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6805..8190)
DNA (1386bp) protein (462aa)
PTS system mannitol-specific transporter subunit IIC (EC:2.7.1.69)
EIICBA-Mtl n=2 Tax=Clostridium symbiosum RepID=E9SQW6_CLOSY
EIICB-Mtl {ECO:0000313|EMBL:ERI79571.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_241_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8431..9660)
DNA (1230bp) protein (410aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Clostridium RepID=E9SQW7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06459.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_360G1_scaffold_241_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10092..11444
DNA (1353bp) protein (451aa)
Polysaccharide deacetylase n=2 Tax=Clostridium symbiosum RepID=E9SQW8_CLOSY
Polysaccharide deacetylase {ECO:0000313|EMBL:ERI76858.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_114_360G1_scaffold_241_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11632..12561
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06461.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_114_360G1_scaffold_241_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12695..13630)
DNA (936bp) protein (312aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SQX0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06462.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
CobW/HypB/UreG, nucleotide-binding domain.
L3_114_360G1_scaffold_241_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13691..14911)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06463.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
cobalamin synthesis protein P47K
L3_114_360G1_scaffold_241_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15007..16539)
DNA (1533bp) protein (511aa)
AbgT transporter n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZD99_9CLOT
AbgT transporter {ECO:0000313|EMBL:CDD44110.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
AbgT transporter
L3_114_360G1_scaffold_241_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16543..18210)
DNA (1668bp) protein (556aa)
Putative aminopeptidase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZL64_9CLOT
Putative aminopeptidase {ECO:0000313|EMBL:CDD44109.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
peptidase M28
L3_114_360G1_scaffold_241_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18376..19329
DNA (954bp) protein (318aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z734_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD44108.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator
L3_114_360G1_scaffold_241_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19446..20270)
DNA (825bp) protein (275aa)
ABC 3 transport family protein n=2 Tax=Clostridium symbiosum RepID=E9SQX2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94125.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L3_114_360G1_scaffold_241_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20267..20977)
DNA (711bp) protein (237aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium RepID=U2BYG5_CLOSY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI76863.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_241_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20978..22042)
DNA (1065bp) protein (355aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SQX4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06466.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L3_114_360G1_scaffold_241_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22039..22722)
DNA (684bp) protein (228aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
HAD hydrolase, family IA, variant 3 n=3 Tax=Clostridium symbiosum RepID=U2BXA4_CLOSY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EGA94122.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_360G1_scaffold_241_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23089..23484
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SQX6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76866.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_114_360G1_scaffold_241_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23510..24256
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SR50_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06469.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_114_360G1_scaffold_241_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24299..24754
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SR51_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06470.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_360G1_scaffold_241_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24997..26982)
DNA (1986bp) protein (662aa)
PTS system fructose-specific EIIBC component family protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C9F0_CLOSY
PTS system fructose-specific EIIBC component family protein {ECO:0000313|EMBL:ERI80633.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
PTS system fructose subfamily transporter subunit IIC
L3_114_360G1_scaffold_241_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27113..28015)
DNA (903bp) protein (301aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Tagatose-6-phosphate kinase n=2 Tax=Clostridium symbiosum RepID=E7GM54_CLOSY
1-phosphofructokinase
L3_114_360G1_scaffold_241_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28182..28853)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SR54_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80631.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_114_360G1_scaffold_241_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28990..30114)
DNA (1125bp) protein (375aa)
RNA polymerase sigma factor SigA n=4 Tax=Clostridium RepID=E7GM52_CLOSY
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L3_114_360G1_scaffold_241_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30295..31212)
DNA (918bp) protein (306aa)
Lipid kinase, YegS/Rv2252/BmrU family n=3 Tax=Clostridium RepID=U2BR45_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94114.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_114_360G1_scaffold_241_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31233..32333)
DNA (1101bp) protein (367aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C9E4_CLOSY
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ERI80628.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_241_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32492..33472)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SR58_CLOSY
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_360G1_scaffold_241_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33479..33820)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DLR3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80626.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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