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L3_114_360G1_scaffold_274

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_274_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73..516)
DNA (444bp) protein (148aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Clostridiales RepID=H1C8F5_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
L3_114_360G1_scaffold_274_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(643..1710)
DNA (1068bp) protein (356aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=4 Tax=Clostridiales RepID=G9YXA8_9FIRM
L3_114_360G1_scaffold_274_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1854..3257
DNA (1404bp) protein (468aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8F2_9FIRM
miaB; isopentenyl-adenosine A37 tRNA methylthiolase
L3_114_360G1_scaffold_274_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3237..3509)
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35201.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_114_360G1_scaffold_274_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3593..3802
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YXA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35200.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
XRE family transcriptional regulator
L3_114_360G1_scaffold_274_6
unknown

Not on your lists

comp(3879..4028)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_114_360G1_scaffold_274_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4515..7112
DNA (2598bp) protein (866aa)
DNA mismatch repair protein MutS n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8E8_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
mutS; DNA mismatch repair protein MutS
L3_114_360G1_scaffold_274_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7690..8394
DNA (705bp) protein (235aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B8Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57370.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_114_360G1_scaffold_274_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8477..10573
DNA (2097bp) protein (699aa)
DNA mismatch repair protein MutL n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8E5_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
mutL; DNA mismatch repair protein MutL
L3_114_360G1_scaffold_274_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10845..11081
DNA (237bp) protein (79aa)
RNA-binding protein Hfq n=3 Tax=Clostridiales RepID=G9YVJ3_9FIRM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hfq; Hfq protein
L3_114_360G1_scaffold_274_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11091..12383
DNA (1293bp) protein (431aa)
Putative membrane fusion protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AGI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57452.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_114_360G1_scaffold_274_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12402..13109
DNA (708bp) protein (236aa)
Pyridoxal phosphate enzyme, YggS family n=3 Tax=Clostridiales RepID=G9YVJ1_9FIRM
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EHO35192.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_114_360G1_scaffold_274_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13133..13633
DNA (501bp) protein (167aa)
Cell division protein SepF n=3 Tax=Clostridiales RepID=G9YVJ0_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
sepF; cell division protein SepF
L3_114_360G1_scaffold_274_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13821..14546
DNA (726bp) protein (242aa)
DivIVA domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AGI8_9CLOT
DivIVA domain protein {ECO:0000313|EMBL:ERI64939.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative cell division protein
L3_114_360G1_scaffold_274_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14952..17747
DNA (2796bp) protein (932aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AZT5_9CLOT
L3_114_360G1_scaffold_274_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18168..20039)
DNA (1872bp) protein (624aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AXT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57447.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_114_360G1_scaffold_274_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20178..20654
DNA (477bp) protein (159aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
lspA; putative signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL13_9CLOT
L3_114_360G1_scaffold_274_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20629..21543
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D6_9FIRM
L3_114_360G1_scaffold_274_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21756..22349
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C8D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57444.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative thiamine transporter
L3_114_360G1_scaffold_274_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22353..23171
DNA (819bp) protein (273aa)
HAD hydrolase, family IIB n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVI2_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EHM40356.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_114_360G1_scaffold_274_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23560..24489)
DNA (930bp) protein (310aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35183.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_114_360G1_scaffold_274_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24708..25274)
DNA (567bp) protein (189aa)
Putative sporulation protein YtaF n=2 Tax=Clostridiales RepID=G9YVH2_9FIRM
Putative sporulation protein YtaF {ECO:0000313|EMBL:ERI79880.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_114_360G1_scaffold_274_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25399..25983
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35181.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative HD superfamily hydrolase
L3_114_360G1_scaffold_274_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25987..27369
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57439.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative efflux protein, MATE family
L3_114_360G1_scaffold_274_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27411..27509)
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35179.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_114_360G1_scaffold_274_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27801..29354
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35178.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_114_360G1_scaffold_274_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29555..30601
DNA (1047bp) protein (349aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.103 1.1.1.14)
Chlorophyll synthesis pathway, bchC n=2 Tax=Clostridiales RepID=H1C8C7_9FIRM
Chlorophyll synthesis pathway, bchC {ECO:0000313|EMBL:EHO35177.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_114_360G1_scaffold_274_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30615..31007
DNA (393bp) protein (131aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (EC:4.4.1.5)
Glyoxalase family protein n=3 Tax=Clostridiales RepID=G9YVG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35176.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_114_360G1_scaffold_274_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31192..31938
DNA (747bp) protein (249aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Clostridiales RepID=G9YVG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35175.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
L3_114_360G1_scaffold_274_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32018..32974
DNA (957bp) protein (319aa)
Phosphotriesterase family protein n=2 Tax=Clostridiales RepID=G9YVG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57434.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
Displaying items 1-30 of 60 in total

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