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L3_114_360G1_scaffold_282

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_282_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16..1854
DNA (1839bp) protein (613aa)
Chaperone protein DnaK n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1I2_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
dnaK4; chaperone protein DnaK
L3_114_360G1_scaffold_282_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2122..3258
DNA (1137bp) protein (379aa)
Chaperone protein DnaJ n=3 Tax=Clostridium butyricum RepID=B1QX13_CLOBU
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
chaperone protein DnaJ
L3_114_360G1_scaffold_282_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3340..3759)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AF38_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87707.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
viral A-type inclusion protein repeat
L3_114_360G1_scaffold_282_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4021..5568
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A4L4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31413.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ferredoxin-nitrite reductase
L3_114_360G1_scaffold_282_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5754..6407
DNA (654bp) protein (218aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase TrmB (EC:2.1.1.33)
UPI0003D60C7E related cluster n=1 Tax=unknown RepID=UPI0003D60C7E
L3_114_360G1_scaffold_282_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7031..7975
DNA (945bp) protein (315aa)
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Ribosomal protein L11 methyltransferase n=2 Tax=Clostridium RepID=PRMA_CLOB8
prmA; 50S ribosomal protein L11 methyltransferase
L3_114_360G1_scaffold_282_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7996..8757
DNA (762bp) protein (254aa)
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRP2_CLOSA
L3_114_360G1_scaffold_282_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8764..10137
DNA (1374bp) protein (458aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SW84_9CLOT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EKQ50333.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
MiaB-like tRNA modifying protein
L3_114_360G1_scaffold_282_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10528..10872
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MIL7_9CLOT
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:AGF54701.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_114_360G1_scaffold_282_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11010..11186
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=5 Tax=Clostridium RepID=A6LRP2_CLOB8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_114_360G1_scaffold_282_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11216..11668
DNA (453bp) protein (151aa)
GatB/YqeY domain-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCF9_9CLOT
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:EHI98071.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_114_360G1_scaffold_282_12
unknown

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11842..12054
DNA (213bp) protein (71aa)

This feature has no annotations

L3_114_360G1_scaffold_282_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12092..12370
DNA (279bp) protein (93aa)
Sporulation protein YqfC n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCG0_9CLOT
Sporulation protein YqfC {ECO:0000313|EMBL:EHI98072.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_114_360G1_scaffold_282_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12376..13506
DNA (1131bp) protein (377aa)
Sporulation protein YqfD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNL2_CLOSA
yqfD; sporulation protein YqfD
Sporulation protein YqfD {ECO:0000313|EMBL:AGX42103.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_114_360G1_scaffold_282_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13539..15671
DNA (2133bp) protein (711aa)
Putative domain HDIG-containing protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMS3_CLOSA
putative domain HDIG-containing protein
Putative domain HDIG-containing protein {ECO:0000313|EMBL:AGX42104.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_114_360G1_scaffold_282_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15677..16177
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Endoribonuclease YbeY n=2 Tax=Clostridium RepID=YBEY_CLOB8
metalloprotease
L3_114_360G1_scaffold_282_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16297..16998
DNA (702bp) protein (234aa)
Diacylglycerol kinase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MR06_CLOSA
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:AGX42106.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_114_360G1_scaffold_282_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17428..18318
DNA (891bp) protein (297aa)
GTPase Era n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M9S9_9CLOT
era; GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_114_360G1_scaffold_282_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18321..19070
DNA (750bp) protein (250aa)
DNA repair protein RecO n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SW78_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
recO; DNA repair protein RecO
L3_114_360G1_scaffold_282_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19077..19700
DNA (624bp) protein (208aa)
Ubiquitin-associated-domain-containing protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LRQ1_CLOB8
ubiquitin-associated domain-containing protein
Ubiquitin-associated-domain-containing protein {ECO:0000313|EMBL:ABR33031.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_114_360G1_scaffold_282_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19902..20540
DNA (639bp) protein (213aa)
Transcriptional repressor CcpN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNE2_CLOSA
ccpN; transcriptional repressor CcpN
Transcriptional repressor CcpN {ECO:0000313|EMBL:AGX42110.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_114_360G1_scaffold_282_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20611..23262
DNA (2652bp) protein (884aa)
Pyruvate, phosphate dikinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TGX5_9CLOT
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EKQ50320.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
pyruvate phosphate dikinase
L3_114_360G1_scaffold_282_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23296..24363)
DNA (1068bp) protein (356aa)
Spore coat protein, CotS family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRQ6_CLOSA
spore coat protein, CotS family
Spore coat protein, CotS family {ECO:0000313|EMBL:AGX42112.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_114_360G1_scaffold_282_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24575..25600
DNA (1026bp) protein (342aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNL9_CLOSA
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000313|EMBL:AGX42113.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_114_360G1_scaffold_282_25
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25811..27583
DNA (1773bp) protein (591aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
DNA primase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1U2_CLOPA
dnaG; DNA primase
L3_114_360G1_scaffold_282_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27621..28730
DNA (1110bp) protein (370aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2D3_CLOBU
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rpoD1; RNA polymerase sigma factor RpoD
L3_114_360G1_scaffold_282_27
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28804..29496
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LRQ8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33038.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_114_360G1_scaffold_282_28
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29513..30301
DNA (789bp) protein (263aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LRQ9_CLOB8
hypothetical protein
L3_114_360G1_scaffold_282_29
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30367..30648
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNM2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42118.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_114_360G1_scaffold_282_30
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31823..32932
DNA (1110bp) protein (370aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVD7_9CLOT
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EKQ51421.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ABC transporter
Displaying items 1-30 of 56 in total

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