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L3_114_360G1_scaffold_308

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_308_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

576..818
DNA (243bp) protein (81aa)
S4 domain protein n=3 Tax=Clostridiales RepID=G9YUP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57184.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_114_360G1_scaffold_308_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(891..1364)
DNA (474bp) protein (158aa)
S1 RNA binding domain protein n=4 Tax=Clostridiales RepID=G9YUP0_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EHM41856.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_114_360G1_scaffold_308_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1371..1646)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C998_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34874.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
septum formation initiator family protein
L3_114_360G1_scaffold_308_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2141..2431)
DNA (291bp) protein (97aa)
Sporulation protein YabP n=3 Tax=Clostridiales RepID=G9YUN8_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:EHO34875.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_114_360G1_scaffold_308_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2502..3041)
DNA (540bp) protein (180aa)
BioY family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57154.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_114_360G1_scaffold_308_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3168..4169
DNA (1002bp) protein (334aa)
birA; transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=2 Tax=Clostridiales RepID=G9YUN6_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_114_360G1_scaffold_308_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4279..5367
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57156.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted membrane protein, putative toxin regulator
L3_114_360G1_scaffold_308_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5502..5849
DNA (348bp) protein (116aa)
Sigma-70 region 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUN4_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EHM41850.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_114_360G1_scaffold_308_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6045..9215
DNA (3171bp) protein (1057aa)
Sel1 repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUN3_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:EHM41849.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_114_360G1_scaffold_308_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9297..9860)
DNA (564bp) protein (188aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9B4_9FIRM
L3_114_360G1_scaffold_308_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9921..11465)
DNA (1545bp) protein (515aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9B5_9FIRM
L3_114_360G1_scaffold_308_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11678..12160)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34834.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative hydrolase
L3_114_360G1_scaffold_308_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12349..12744
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM52529.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Zn-finger containing protein
L3_114_360G1_scaffold_308_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12860..13123
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YPN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34836.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_114_360G1_scaffold_308_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13209..15044
DNA (1836bp) protein (612aa)
Cadmium-exporting ATPase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPN1_9FIRM
Cadmium-exporting ATPase {ECO:0000313|EMBL:EHM52531.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
L3_114_360G1_scaffold_308_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15315..15584)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34839.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_114_360G1_scaffold_308_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15895..17442)
DNA (1548bp) protein (516aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ56_9FIRM
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EHM52051.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
selenocysteine-specific translation elongation factor
L3_114_360G1_scaffold_308_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17439..18770)
DNA (1332bp) protein (444aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Clostridiales RepID=H1C9C4_9FIRM
L-seryl-tRNA selenium transferase
L3_114_360G1_scaffold_308_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19000..20523
DNA (1524bp) protein (508aa)
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
4Fe-4S binding domain protein n=3 Tax=Clostridiales RepID=G9YQ53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34843.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_114_360G1_scaffold_308_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20571..21689)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BB06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75314.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_114_360G1_scaffold_308_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21885..23081
DNA (1197bp) protein (399aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9C7_9FIRM
L3_114_360G1_scaffold_308_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23101..23541
DNA (441bp) protein (147aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=3 Tax=Clostridiales RepID=G9YQ49_9FIRM
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:EHO34846.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
nifU; NifU
L3_114_360G1_scaffold_308_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23658..24662
DNA (1005bp) protein (335aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9C9_9FIRM
ABC transporter
L3_114_360G1_scaffold_308_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24655..25431
DNA (777bp) protein (259aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=U2BSV5_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI75320.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type metal ion transport system, permease component
L3_114_360G1_scaffold_308_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25884..26756
DNA (873bp) protein (291aa)
Lipoprotein n=2 Tax=Clostridiales RepID=G9YQ44_9FIRM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
NLPA lipoprotein
L3_114_360G1_scaffold_308_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26880..27794
DNA (915bp) protein (305aa)
Cysteine synthase A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ43_9FIRM
Cysteine synthase A {ECO:0000313|EMBL:EHM52038.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
cysteine synthase A
L3_114_360G1_scaffold_308_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27865..28569)
DNA (705bp) protein (235aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Clostridiales RepID=U2D1I5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57110.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cAMP-binding protein
L3_114_360G1_scaffold_308_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28804..30147
DNA (1344bp) protein (448aa)
Amidohydrolase family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D735_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57111.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
amidohydrolase 3
L3_114_360G1_scaffold_308_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30205..30405
DNA (201bp) protein (67aa)
Amidohydrolase family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D735_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34852.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
amidohydrolase
L3_114_360G1_scaffold_308_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30405..31256
DNA (852bp) protein (284aa)
Amidohydrolase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPU6_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:EHM52346.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Displaying items 1-30 of 56 in total

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