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L3_114_360G1_scaffold_314

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_314_1
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(646..1311)
DNA (666bp) protein (222aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M576_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ94473.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_314_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1326..2591)
DNA (1266bp) protein (422aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQB5_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERJ94472.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein predicted by Glimmer/Critica
L3_114_360G1_scaffold_314_3
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2588..3739)
DNA (1152bp) protein (384aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K7I4_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERJ94471.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein predicted by Glimmer/Critica
L3_114_360G1_scaffold_314_4
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4621..4761)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FH03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE12977.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
L3_114_360G1_scaffold_314_5
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4754..5344)
DNA (591bp) protein (197aa)
Accessory protein regulator protein B n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FE87_9FIRM
Accessory protein regulator protein B {ECO:0000313|EMBL:CDE12976.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
hypothetical protein
L3_114_360G1_scaffold_314_6
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5552..6268
DNA (717bp) protein (239aa)
Response regulator of the LytR/AlgR family n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FDN8_9FIRM
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CDE12975.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
Response regulator of the LytR/AlgR family
L3_114_360G1_scaffold_314_7
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6265..7560
DNA (1296bp) protein (432aa)
Histidine kinase-DNA gyrase B-and HSP90-like ATPase n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FCC0_9FIRM
Histidine kinase-DNA gyrase B-and HSP90-like ATPase {ECO:0000313|EMBL:CDE12974.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_114_360G1_scaffold_314_8
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8647..8859
DNA (213bp) protein (71aa)
FeoA domain n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FE86_9FIRM
FeoA domain {ECO:0000313|EMBL:CDE12027.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
Fe2+ transport system protein A
L3_114_360G1_scaffold_314_9
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8876..9097
DNA (222bp) protein (74aa)
Fe2+ transport system protein A n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FC18_9FIRM
Fe2+ transport system protein A {ECO:0000313|EMBL:CDE12028.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
Fe2+ transport system protein A
L3_114_360G1_scaffold_314_10
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9229..11736
DNA (2508bp) protein (836aa)
Ferrous iron transport protein B n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWJ8_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:ERJ96460.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
ferrous iron transporter FeoB
L3_114_360G1_scaffold_314_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11775..11951
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KW01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96467.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
conserved hypothetical protein
L3_114_360G1_scaffold_314_12
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12121..12246
DNA (126bp) protein (42aa)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KD48_9FIRM
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:ERJ96466.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_314_13
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12344..12826)
DNA (483bp) protein (161aa)
Large-conductance mechanosensitive channel n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3Y7_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
large conductance mechanosensitive channel protein
L3_114_360G1_scaffold_314_14
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12847..13989)
DNA (1143bp) protein (381aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3Z5_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ERJ96474.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
D-alanyl-D-alanine carboxypeptidase
L3_114_360G1_scaffold_314_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14241..15275)
DNA (1035bp) protein (345aa)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KW06_9FIRM
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:ERJ96472.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
biotin synthase
L3_114_360G1_scaffold_314_16
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15409..16440
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KD52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96471.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_314_17
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16503..17480)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ96470.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_314_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17502..18251)
DNA (750bp) protein (250aa)
SCP-like protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3Z1_9FIRM
SCP-like protein {ECO:0000313|EMBL:ERJ96469.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
SCP-like extracellular protein
L3_114_360G1_scaffold_314_19
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18426..20099)
DNA (1674bp) protein (558aa)
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases (EC:6.2.1.1)
AMP-binding enzyme n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M318_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:ERJ93733.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_314_20
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20326..22188)
DNA (1863bp) protein (621aa)
Cadmium-exporting ATPase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNU2_9FIRM
Cadmium-exporting ATPase {ECO:0000313|EMBL:ERJ93735.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
heavy metal-translocating P-type ATPase
L3_114_360G1_scaffold_314_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22403..22624)
DNA (222bp) protein (74aa)
Heavy metal-associated domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5F8_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:ERJ93736.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Cation transport ATPase
L3_114_360G1_scaffold_314_22
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22836..24407)
DNA (1572bp) protein (524aa)
Beta-mannanase (EC:3.2.1.78)
Glycosyl hydrolase family 26 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M323_9FIRM
Glycosyl hydrolase family 26 {ECO:0000313|EMBL:ERJ93738.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_314_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24622..26943)
DNA (2322bp) protein (774aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LW80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93739.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L3_114_360G1_scaffold_314_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26945..27118)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93740.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_314_25
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27648..28565)
DNA (918bp) protein (306aa)
Prepilin-type N-terminal cleavage/methylation domain n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLB7_9FIRM
Prepilin-type N-terminal cleavage/methylation domain {ECO:0000313|EMBL:CCY13371.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
prepilin-type N-terminal cleavage/methylation domain
L3_114_360G1_scaffold_314_26
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28867..29916
DNA (1050bp) protein (350aa)
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LW84_9FIRM
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:ERJ93744.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_114_360G1_scaffold_314_27
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29908..30282)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ93745.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
L3_114_360G1_scaffold_314_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30715..31485
DNA (771bp) protein (257aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5G8_9FIRM
L3_114_360G1_scaffold_314_29
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31487..32173
DNA (687bp) protein (229aa)
Putative sensory transduction protein RegX3 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K5D3_9FIRM
Putative sensory transduction protein RegX3 {ECO:0000313|EMBL:ERJ93711.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
phoB; Two-component system transcriptional regulator PhoB
L3_114_360G1_scaffold_314_30
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32176..33393
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
phoR; Two-component system sensor histidine kinase PhoR (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KN54_9FIRM
Displaying items 1-30 of 43 in total

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