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L3_114_360G1_scaffold_325

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_325_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

106..654
DNA (549bp) protein (183aa)
PTS system, Fru family, IIC component n=2 Tax=Ruminococcus RepID=C6J7Z7_9FIRM
PTS system, Fru family, IIC component {ECO:0000313|EMBL:EES78449.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L3_114_360G1_scaffold_325_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

714..971
DNA (258bp) protein (86aa)
HPr family phosphocarrier n=2 Tax=Ruminococcus RepID=C6J7Z6_9FIRM
HPr family phosphocarrier {ECO:0000313|EMBL:EES78448.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphotransferase System HPr (HPr) Family
L3_114_360G1_scaffold_325_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1266..2009
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78447.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulators of sugar metabolism
L3_114_360G1_scaffold_325_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2050..3213
DNA (1164bp) protein (388aa)
Exonuclease SbcCD, D subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z4_9FIRM
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EES78446.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
exonuclease SbcD
L3_114_360G1_scaffold_325_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3210..6563
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78445.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
SMC domain-containing protein
L3_114_360G1_scaffold_325_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6917..7468
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78444.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_360G1_scaffold_325_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7617..8039
DNA (423bp) protein (141aa)
Flavodoxin n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z1_9FIRM
Flavodoxin {ECO:0000313|EMBL:EES78443.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
flavodoxin, short chain
L3_114_360G1_scaffold_325_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8322..9230)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78442.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
AraC family transcriptional regulator
L3_114_360G1_scaffold_325_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9348..10700
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES78441.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Na+ driven multidrug efflux pump
L3_114_360G1_scaffold_325_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10833..11468
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78440.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transferase hexapeptide repeat containing protein
L3_114_360G1_scaffold_325_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11753..12055
DNA (303bp) protein (101aa)
Anti-sigma factor antagonist n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y7_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative anti-sigma-factor antagonist
L3_114_360G1_scaffold_325_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12138..12545
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y6_9FIRM
Anti-sigma regulatory factor {ECO:0000313|EMBL:CDD78826.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_114_360G1_scaffold_325_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12912..14201
DNA (1290bp) protein (430aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78824.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative virion core protein (lumpy skin disease virus)
L3_114_360G1_scaffold_325_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14220..15314
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78436.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_360G1_scaffold_325_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15330..16172
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78435.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_360G1_scaffold_325_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16459..17235
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7Y2_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_114_360G1_scaffold_325_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17298..18038
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78433.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC transporter-like protein
L3_114_360G1_scaffold_325_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18108..19202
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78432.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_360G1_scaffold_325_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19265..20371
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J7X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78817.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycosyltransferase
L3_114_360G1_scaffold_325_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20379..21413
DNA (1035bp) protein (345aa)
wcwK; Capsular polysaccharide phosphotransferase WcwK (EC:2.7.-.-)
Capsular polysaccharide phosphotransferase wcwK n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLD3_9FIRM
Capsular polysaccharide phosphotransferase wcwK {ECO:0000313|EMBL:CDD78816.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_360G1_scaffold_325_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21394..22653
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78815.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L3_114_360G1_scaffold_325_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22714..23130
DNA (417bp) protein (139aa)
Glycerol-3-phosphate cytidylyltransferase n=2 Tax=Ruminococcus RepID=C6J7X6_9FIRM
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:CDD78814.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycerol-3-phosphate cytidyltransferase
L3_114_360G1_scaffold_325_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23141..24430
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CN50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78813.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L3_114_360G1_scaffold_325_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24638..27526
DNA (2889bp) protein (963aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLD0_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:CDD78811.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L3_114_360G1_scaffold_325_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27666..28445)
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKS6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase, sigma subunit, RpsG/SigG
L3_114_360G1_scaffold_325_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29200..29649
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=2 Tax=Ruminococcus RepID=C6J7X0_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator NrdR
L3_114_360G1_scaffold_325_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29947..31281)
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Ruminococcus RepID=C6J7W9_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_114_360G1_scaffold_325_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31872..33233
DNA (1362bp) protein (454aa)
Citrate synthase (EC:2.3.3.1 2.3.3.5)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W8_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_360G1_scaffold_325_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33328..33831
DNA (504bp) protein (168aa)
HAD phosphatase, family IIIA n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W7_9FIRM
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EES78419.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L3_114_360G1_scaffold_325_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33828..34352
DNA (525bp) protein (175aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7W6_9FIRM
Displaying items 1-30 of 46 in total

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