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L3_114_360G1_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_338_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..557)
DNA (555bp) protein (185aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUZ5_CLOBO
acetyltransferase family protein
Acetyltransferase family protein {ECO:0000313|EMBL:AIY82611.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_114_360G1_scaffold_338_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(635..1681)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY29373.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative transposase
L3_114_360G1_scaffold_338_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1987..2559)
DNA (573bp) protein (191aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWY8_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EKQ51552.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
sigma-70 family RNA polymerase sigma factor
L3_114_360G1_scaffold_338_4
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3104..3616
DNA (513bp) protein (171aa)
Ferridoxin n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRJ7_SYNAS
ferridoxin
Ferridoxin {ECO:0000313|EMBL:ABC76704.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
L3_114_360G1_scaffold_338_5
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4031..4609
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61158.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L3_114_360G1_scaffold_338_6
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4626..5525
DNA (900bp) protein (300aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7HWQ1_9CLOT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDE42662.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
short-chain dehydrogenase/reductase SDR
L3_114_360G1_scaffold_338_7
unknown

Not on your lists

5669..6034
DNA (366bp) protein (122aa)

This feature has no annotations

L3_114_360G1_scaffold_338_8
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6295..6993
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Streptococcus thoraltensis RepID=UPI0003632749
Uncharacterized protein {ECO:0000313|EMBL:EGH44596.1}; TaxID=629263 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. pisi str. 1704B.;"
hypothetical protein
L3_114_360G1_scaffold_338_9
unknown

Not on your lists

7495..7623
DNA (129bp) protein (43aa)

This feature has no annotations

L3_114_360G1_scaffold_338_10
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7641..8135
DNA (495bp) protein (165aa)
Flavodoxin n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XF85_9FIRM
Flavodoxin {ECO:0000313|EMBL:CDA13505.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
flavodoxin
L3_114_360G1_scaffold_338_11
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8213..9385
DNA (1173bp) protein (391aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DQG2_9FIRM
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EHQ90637.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
iron-containing alcohol dehydrogenase
L3_114_360G1_scaffold_338_12
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9502..9789
DNA (288bp) protein (96aa)
Transposase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FP85_CLOPA
Transposase {ECO:0000313|EMBL:ETD65681.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Tn554-related, transposase C
L3_114_360G1_scaffold_338_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9895..10899
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QYH5_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDS20167.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
aldehyde oxidase
L3_114_360G1_scaffold_338_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11274..12239
DNA (966bp) protein (322aa)
Pyridoxine 4-dehydrogenase {ECO:0000313|EMBL:EHI99188.1}; EC=1.1.1.65 {ECO:0000313|EMBL:EHI99188.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Pyridoxine 4-dehydrogenase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4W8_9CLOT
aldehyde oxidase
L3_114_360G1_scaffold_338_15
unknown

Not on your lists

12261..12356
DNA (96bp) protein (32aa)

This feature has no annotations

L3_114_360G1_scaffold_338_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12374..12763
DNA (390bp) protein (130aa)
Putative transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TDP3_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:KJU72862.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_114_360G1_scaffold_338_17
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13180..14652
DNA (1473bp) protein (491aa)
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCV5_9CLOT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EHI98685.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
arabinose efflux permease
L3_114_360G1_scaffold_338_18
Fusobacterium sp. OBRC1, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14943..15569
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum ChDC F128 RepID=J8VHT4_FUSNU
Flavodoxin {ECO:0000313|EMBL:EUB33406.1}; TaxID=1032505 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. OBRC1.;"
hypothetical protein
L3_114_360G1_scaffold_338_19
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15733..16566
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8M7_DESOD
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AET67454.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_114_360G1_scaffold_338_20
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17668..18126
DNA (459bp) protein (153aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IJE7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM57279.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L3_114_360G1_scaffold_338_21
unknown

Not on your lists

18554..18715
DNA (162bp) protein (54aa)

This feature has no annotations

L3_114_360G1_scaffold_338_22
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18687..18983
DNA (297bp) protein (99aa)
rRNA biogenesis protein rrp5 n=1 Tax=Bacillus methanolicus PB1 RepID=I3E6I2_BACMT
rRNA biogenesis protein rrp5 {ECO:0000313|EMBL:EIJ82103.1}; TaxID=997296 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus PB1.;"
hypothetical protein
L3_114_360G1_scaffold_338_23
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19261..19800
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SSD3_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL50530.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_114_360G1_scaffold_338_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19938..21878
DNA (1941bp) protein (647aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJY9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94883.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA-directed DNA polymerase
L3_114_360G1_scaffold_338_25
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22063..24522
DNA (2460bp) protein (820aa)
Virulence-associated E family protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SSD5_CLOC7
virulence-associated E family protein
Virulence-associated E family protein {ECO:0000313|EMBL:ADL50532.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_114_360G1_scaffold_338_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24964..25191
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28094.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_114_360G1_scaffold_338_27
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(25457..26167)
DNA (711bp) protein (237aa)
glycerol transporter n=1 Tax=[Clostridium] glycolicum RepID=UPI00037C6699
Aquaglyceroporin {ECO:0000313|EMBL:CRH85488.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
glycerol uptake facilitator related permease (major Intrinsic protein family)
L3_114_360G1_scaffold_338_28
Lactobacillus plantarum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26183..26605)
DNA (423bp) protein (141aa)
lactate racemization operon protein n=1 Tax=Lactobacillus plantarum RepID=UPI000398C4CA
lactate racemization operon protein
Uncharacterized protein {ECO:0000313|EMBL:ERL45151.1}; TaxID=1358413 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus plantarum AY01.;"
L3_114_360G1_scaffold_338_29
Lactobacillus plantarum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26620..27399)
DNA (780bp) protein (260aa)
Lactate racemization operon protein LarC,N-terminal domain n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp41 RepID=S2RYE9_LACPA
lactate racemization operon protein LarC,N-terminal domain protein
UPF0272 protein LBP_cg0089 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=767468 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus plantarum subsp. plantarum P-8.;"
L3_114_360G1_scaffold_338_30
Pediococcus pentosaceus, Pediococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27409..28077)
DNA (669bp) protein (223aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C08D
NCAIR mutase (PurE)-related protein
NCAIR mutase (PurE)-related protein {ECO:0000313|EMBL:ABJ68714.1}; TaxID=278197 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus.;" source="Pediococcus pentosaceus (strain ATCC 25745 / 183-1w).;"
Displaying items 1-30 of 56 in total

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