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L3_114_360G1_scaffold_346

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_346_1
unknown

Not on your lists

1..225
DNA (225bp) protein (75aa)

This feature has no annotations

L3_114_360G1_scaffold_346_2
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

Not on your lists

249..485
DNA (237bp) protein (79aa)
Putative transposase orfB for insertion sequence element IS3 family n=1 Tax=Clostridium sp. CAG:628 RepID=R7ME15_9CLOT
Integrase core domain protein
Integrase core domain protein {ECO:0000313|EMBL:AIO18496.1}; TaxID=1541959 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
L3_114_360G1_scaffold_346_3
Clostridium sp. CAG:710, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

487..849
DNA (363bp) protein (121aa)
Putative transposase orfB for insertion sequence element IS3 family n=1 Tax=Clostridium sp. CAG:710 RepID=R5T1Q1_9CLOT
Putative transposase orfB for insertion sequence element IS3 family {ECO:0000313|EMBL:CCZ59443.1}; TaxID=1262833 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:710.;"
Integrase core domain protein
L3_114_360G1_scaffold_346_4
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1008..3380
DNA (2373bp) protein (791aa)
Lysyl transferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288E709
Lysyl transferase {ECO:0000313|EMBL:KEI15285.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691.;"
Lysyl transferase
L3_114_360G1_scaffold_346_5
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3447..3935)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1J4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEA84378.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
putative acetyltransferase protein
L3_114_360G1_scaffold_346_6
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3947..4645)
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JG99_CELLD
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADZ81794.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_346_7
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4659..6488)
DNA (1830bp) protein (610aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JG98_CELLD
integral membrane sensor signal transduction histidine kinase
L3_114_360G1_scaffold_346_8
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6505..7680)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSL2_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ81792.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_346_9
unknown

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comp(7684..8388)
DNA (705bp) protein (235aa)

This feature has no annotations

L3_114_360G1_scaffold_346_10
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8550..10343)
DNA (1794bp) protein (598aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVH4_CLOC7
DNA mismatch repair protein MutS {ECO:0000313|EMBL:KEZ86699.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
DNA mismatch repair protein MutS domain-containing protein
L3_114_360G1_scaffold_346_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10512..11114)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRF5_CELLD
recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_346_12
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11114..11449)
DNA (336bp) protein (112aa)
Nucleoid-associated protein Clole_1031 n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRF4_CELLD
hypothetical protein
Nucleoid-associated protein Clole_1031 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_346_13
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11463..13070)
DNA (1608bp) protein (536aa)
DNA polymerase III, subunits gamma and tau n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRF3_CELLD
DNA polymerase III subunits gamma and tau
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:ADZ82762.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_346_14
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13134..13487)
DNA (354bp) protein (118aa)
Transcriptional regulator, Spx/MgsR family n=2 Tax=Clostridium RepID=B6FV94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85297.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
L3_114_360G1_scaffold_346_15
unknown

Not on your lists

13594..13884
DNA (291bp) protein (97aa)

This feature has no annotations

L3_114_360G1_scaffold_346_16
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14301..14738)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRF0_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82759.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_346_17
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14808..15317)
DNA (510bp) protein (170aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRE9_CELLD
CMP/dCMP deaminase zinc-binding protein
L3_114_360G1_scaffold_346_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15632..17059
DNA (1428bp) protein (476aa)
Putative GerA spore germination protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FK98_9CLOT
Putative GerA spore germination protein {ECO:0000313|EMBL:CDG01069.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
GerA spore germination protein
L3_114_360G1_scaffold_346_19
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17146..17940
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YW60_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60682.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
L3_114_360G1_scaffold_346_20
unknown

Not on your lists

comp(18013..18405)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0458
L3_114_360G1_scaffold_346_21
Bacillus sp. M 2-6, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18480..19058)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI00037AFD65
Uncharacterized protein {ECO:0000313|EMBL:EIL83349.1}; TaxID=1177926 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. M 2-6.;"
hypothetical protein
L3_114_360G1_scaffold_346_22
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19421..20311)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ76_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82624.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_346_23
unknown

Not on your lists

comp(20482..20676)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_114_360G1_scaffold_346_24
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20936..21859)
DNA (924bp) protein (308aa)
Polysaccharide deacetylase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ73_CELLD
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADZ82621.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_346_25
unknown

Not on your lists

comp(21893..22195)
DNA (303bp) protein (101aa)

This feature has no annotations

L3_114_360G1_scaffold_346_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23122..23487)
DNA (366bp) protein (122aa)
IG hypothetical 16873 protein n=1 Tax=Clostridium sp. D5 RepID=F0YYR3_9CLOT
IG hypothetical 16873 protein {ECO:0000313|EMBL:EGB93365.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_114_360G1_scaffold_346_27
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23656..25443)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MUP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86374.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ABC transporter ATP-binding protein
L3_114_360G1_scaffold_346_28
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25446..27266)
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DDDDCC
Uncharacterized protein {ECO:0000313|EMBL:EQB86373.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ABC transporter
L3_114_360G1_scaffold_346_29
Paenibacillus sp. MAEPY2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27289..28902)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00035D6610
Uncharacterized protein {ECO:0000313|EMBL:KGP79193.1}; TaxID=1395587 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MAEPY2.;"
sigma-70 family RNA polymerase sigma factor
L3_114_360G1_scaffold_346_30
unknown

Not on your lists

29382..29615
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying items 1-30 of 61 in total

View Taxonomy