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L3_114_360G1_scaffold_408

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_408_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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597..1616
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=4 Tax=Clostridium RepID=U2DEN5_CLOSY
L3_114_360G1_scaffold_408_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1692..4112
DNA (2421bp) protein (807aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SMJ5_CLOSY
L3_114_360G1_scaffold_408_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4414..9123
DNA (4710bp) protein (1570aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FHT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04058.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L3_114_360G1_scaffold_408_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9267..10535
DNA (1269bp) protein (423aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
enolase (EC:4.2.1.11)
Enolase n=3 Tax=Clostridium RepID=E7GKU8_CLOSY
L3_114_360G1_scaffold_408_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10791..11804
DNA (1014bp) protein (338aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
Putative 4-hydroxy-2-oxovalerate aldolase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DEN0_CLOSY
Putative 4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:ERI79907.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_408_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11806..12771
DNA (966bp) protein (322aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=2 Tax=Clostridium RepID=E7GKU6_CLOSY
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EGA94534.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_360G1_scaffold_408_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12796..14196
DNA (1401bp) protein (467aa)
Putative sodium/glutamate symporter n=2 Tax=Clostridium symbiosum RepID=U2BP39_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94533.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Na+/glutamate symporter
L3_114_360G1_scaffold_408_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14219..15361
DNA (1143bp) protein (381aa)
Amidohydrolase family protein n=3 Tax=Clostridium RepID=E9SMI8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94532.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
amidohydrolase
L3_114_360G1_scaffold_408_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15493..15729
DNA (237bp) protein (79aa)
Preprotein translocase, SecG subunit n=4 Tax=Clostridium RepID=E9SMI7_CLOSY
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EHF04065.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
protein translocase, SecG subunit
L3_114_360G1_scaffold_408_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15851..18169
DNA (2319bp) protein (773aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Ribonuclease R n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FHU0_9CLOT
ribonuclease R
L3_114_360G1_scaffold_408_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18199..18663
DNA (465bp) protein (155aa)
SsrA-binding protein n=4 Tax=Clostridium RepID=E7GKU1_CLOSY
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
SsrA-binding protein
L3_114_360G1_scaffold_408_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19314..19706
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FHU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03990.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
glyoxalase/bleomycin resistance protein/dioxygenase
L3_114_360G1_scaffold_408_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19926..20474)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SMI3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94527.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_360G1_scaffold_408_14
unknown

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comp(20507..21520)
DNA (1014bp) protein (338aa)

This feature has no annotations

L3_114_360G1_scaffold_408_15
unknown

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comp(21544..21711)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_114_360G1_scaffold_408_16
unknown

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comp(21714..22106)
DNA (393bp) protein (131aa)
hypothetical protein
L3_114_360G1_scaffold_408_17
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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22190..22726
DNA (537bp) protein (179aa)
Site-specific recombinase, phage integrase family n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RYY0_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFF68799.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
phage integrase family site specific recombinase
L3_114_360G1_scaffold_408_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23012..23992)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRH4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92630.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_114_360G1_scaffold_408_19
unknown

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comp(24083..24244)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A4 RepID=R0DA19_9CLOT
L3_114_360G1_scaffold_408_20
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24244..24561)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A1 RepID=N9YB01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98680.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_114_360G1_scaffold_408_21
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24585..25964)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FIR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EXG87865.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_114_360G1_scaffold_408_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25967..26692)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IF40_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59879.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_114_360G1_scaffold_408_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26692..28164)
DNA (1473bp) protein (491aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IF41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59880.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_114_360G1_scaffold_408_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28180..29073)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IF42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59881.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_114_360G1_scaffold_408_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29076..30155)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IF43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59882.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_114_360G1_scaffold_408_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30199..30969)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F7W4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07494.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_360G1_scaffold_408_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31026..31859)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F7W3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07493.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_360G1_scaffold_408_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31890..35753)
DNA (3864bp) protein (1288aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F7W3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07493.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
sspA; streptococcal surface protein A
L3_114_360G1_scaffold_408_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35865..36275
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BP11_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI79874.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_408_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36652..36984
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FHU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03994.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
Displaying items 1-30 of 51 in total

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