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L3_114_360G1_scaffold_421

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_421_1
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..987)
DNA (987bp) protein (329aa)
Terminase n=1 Tax=Clostridium sp. CAG:230 RepID=R6DHA9_9CLOT
Terminase {ECO:0000313|EMBL:CDA87953.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
terminase
L3_114_360G1_scaffold_421_2
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(971..1357)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD115 RepID=J8KUA0_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJR67518.1}; TaxID=1053230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD115.;"
hypothetical protein
L3_114_360G1_scaffold_421_3
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1457..1780)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZ48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85560.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
prophage LambdaBa04, GP54
L3_114_360G1_scaffold_421_4
unknown

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comp(1850..2941)
DNA (1092bp) protein (364aa)

This feature has no annotations

L3_114_360G1_scaffold_421_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3240..3629)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GTR5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91877.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_360G1_scaffold_421_6
unknown

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comp(3619..3870)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_114_360G1_scaffold_421_7
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(3893..4114)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RDW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47048.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L3_114_360G1_scaffold_421_8
unknown

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comp(4083..4259)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_114_360G1_scaffold_421_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4270..6294)
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XI43_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15016.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_114_360G1_scaffold_421_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6291..7046)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D5T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI92130.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
phage-related regulatory protein
L3_114_360G1_scaffold_421_11
unknown

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comp(7071..7220)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_114_360G1_scaffold_421_12
unknown

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comp(7222..7416)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_114_360G1_scaffold_421_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7430..7978)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XC34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93463.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_114_360G1_scaffold_421_14
unknown

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comp(8078..8209)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_114_360G1_scaffold_421_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8169..8399)
DNA (231bp) protein (77aa)
DNA binding domain, excisionase family n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DHE0_CLOSC
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK77114.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_114_360G1_scaffold_421_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8403..8933)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X111_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93457.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_114_360G1_scaffold_421_17
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9076..9909)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KXP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48257.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
putative Phage-related protein
L3_114_360G1_scaffold_421_18
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9923..10117)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PH04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC20064.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
toxin-antitoxin system
L3_114_360G1_scaffold_421_19
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10262..10666
DNA (405bp) protein (135aa)
Helix-turn-helix domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNV3_CELLD
hypothetical protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADZ82451.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_114_360G1_scaffold_421_20
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10847..11377
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZCA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11420.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
Predicted transcriptional regulators
L3_114_360G1_scaffold_421_21
unknown

Not on your lists

11480..11980
DNA (501bp) protein (167aa)

This feature has no annotations

L3_114_360G1_scaffold_421_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12082..13521
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VSE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93449.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Site-specific recombinase XerD
L3_114_360G1_scaffold_421_23
unknown

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comp(13473..13694)
DNA (222bp) protein (74aa)

This feature has no annotations

L3_114_360G1_scaffold_421_24
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(13899..14873)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035FE081
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDC46695.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
phosphoglycerate dehydrogenase-like protein
L3_114_360G1_scaffold_421_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14930..16243)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000374A913
Uncharacterized protein {ECO:0000313|EMBL:CDC43249.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_114_360G1_scaffold_421_26
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(16517..17101)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003734D45
Uncharacterized protein {ECO:0000313|EMBL:CDC92684.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
RNA polymerase, sigma 30 subunit, SigH
L3_114_360G1_scaffold_421_27
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(17105..17854)
DNA (750bp) protein (250aa)
RNA methyltransferase n=1 Tax=Blautia producta RepID=UPI00035E2180
RNA methyltransferase {ECO:0000313|EMBL:CDC92686.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
putative tRNA/rRNA methyltransferase
L3_114_360G1_scaffold_421_28
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17829..18278)
DNA (450bp) protein (150aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
ribonuclease III n=1 Tax=Blautia producta RepID=UPI00035EF5E8
hypothetical protein
L3_114_360G1_scaffold_421_29
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(18263..19669)
DNA (1407bp) protein (469aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase n=1 Tax=Blautia producta RepID=UPI00035F73F1
L3_114_360G1_scaffold_421_30
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(19674..20345)
DNA (672bp) protein (224aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
serine O-acetyltransferase (EC:2.3.1.30)
serine O-acetyltransferase n=1 Tax=Blautia producta RepID=UPI000361D02A
Displaying items 1-30 of 60 in total

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