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L3_114_360G1_scaffold_466

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_466_1
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82..207)
DNA (126bp) protein (42aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3E5_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72735.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_466_2
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2037..2516
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XT56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11966.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
L3_114_360G1_scaffold_466_3
unknown

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3274..3663
DNA (390bp) protein (130aa)

This feature has no annotations

L3_114_360G1_scaffold_466_4
unknown

Not on your lists

4241..4408
DNA (168bp) protein (56aa)

This feature has no annotations

L3_114_360G1_scaffold_466_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4889..5167)
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EUB4_9FIRM
CRISPR-associated protein, Cas2 family
L3_114_360G1_scaffold_466_6
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5171..6145)
DNA (975bp) protein (325aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFZ4_9FIRM
CRISPR-associated protein, Cas1 family
L3_114_360G1_scaffold_466_7
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6184..6678)
DNA (495bp) protein (165aa)
CRISPR-associated protein Cas4 n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L3W1_BLAHA
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:EEX23200.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
CRISPR-associated exonuclease, Cas4 family
L3_114_360G1_scaffold_466_8
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6703..8973)
DNA (2271bp) protein (757aa)
CRISPR-associated helicase Cas3 n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L3W2_BLAHA
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:EEX23201.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
CRISPR-associated helicase Cas3
L3_114_360G1_scaffold_466_9
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9024..9740)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AS04_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57350.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
CRISPR-associated protein Cas5, Tneap subtype
L3_114_360G1_scaffold_466_10
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9733..10602)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AS03_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57349.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
CRISPR-associated autoregulator, Cst2 family
L3_114_360G1_scaffold_466_11
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10603..12363)
DNA (1761bp) protein (587aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AS02_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57348.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
CRISPR-associated CXXC_CXXC protein Cst1
L3_114_360G1_scaffold_466_12
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12387..13109)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AS01_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57347.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
L3_114_360G1_scaffold_466_13
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13409..14620
DNA (1212bp) protein (404aa)
Solute carrier family 1 (Glial high affinity glutamate transporter), member 2 n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3E7_EUBE2
solute carrier family 1 (glial high affinity glutamate transporter), member 2
Solute carrier family 1 (Glial high affinity glutamate transporter), member 2 {ECO:0000313|EMBL:ACR72737.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_466_14
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14699..15043
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3E8_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72738.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_466_15
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15103..15744)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3E9_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72739.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_466_16
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15744..16592)
DNA (849bp) protein (283aa)
ABC-2 type transport system ATP-binding protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3F0_EUBE2
ABC transporter ATP-binding protein
ABC-2 type transport system ATP-binding protein {ECO:0000313|EMBL:ACR72740.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_466_17
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16604..17077)
DNA (474bp) protein (158aa)
GntR family transcriptional regulator n=2 Tax=Eubacterium RepID=C4Z3R6_EUBE2
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:ACR72741.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_466_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17276..20005)
DNA (2730bp) protein (910aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=D4JKS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBK94224.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Uncharacterized conserved protein (DUF2075)./Protein of unknown function (DUF2726)./Viral (Superfamily 1) RNA helicase.
L3_114_360G1_scaffold_466_19
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20487..20843)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3U9_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72774.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_466_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20827..21849)
DNA (1023bp) protein (341aa)
Virulence protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKS1_9FIRM
Virulence protein
Virulence protein {ECO:0000313|EMBL:CBK94218.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_114_360G1_scaffold_466_21
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21846..22196)
DNA (351bp) protein (117aa)
Spx/MgsR family transcriptional regulator n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MHH7_9FIRM
Spx/MgsR family transcriptional regulator {ECO:0000313|EMBL:EOS70465.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_114_360G1_scaffold_466_22
unknown

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comp(22216..23250)
DNA (1035bp) protein (345aa)

This feature has no annotations

L3_114_360G1_scaffold_466_23
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23312..23440)
DNA (129bp) protein (43aa)
Divergent AAA domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VHL4_9CLOT
Divergent AAA domain protein {ECO:0000313|EMBL:EDO56723.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_114_360G1_scaffold_466_24
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23607..23879)
DNA (273bp) protein (91aa)
Divergent AAA domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VHL4_9CLOT
Divergent AAA domain protein {ECO:0000313|EMBL:EDO56723.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_114_360G1_scaffold_466_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24170..24754)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27588.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_114_360G1_scaffold_466_26
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24760..25083)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T496_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97701.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_114_360G1_scaffold_466_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25167..25352)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZCT7_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74442.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_114_360G1_scaffold_466_28
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25759..29487)
DNA (3729bp) protein (1243aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RYW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68818.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L3_114_360G1_scaffold_466_29
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29627..29803)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JVX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY53171.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
L3_114_360G1_scaffold_466_30
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29760..29924)
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97700.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Displaying items 1-30 of 50 in total

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