ggKbase home page

L3_114_360G1_scaffold_525

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_525_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124..570)
DNA (447bp) protein (149aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23118.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_114_360G1_scaffold_525_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(584..1270)
DNA (687bp) protein (229aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96955.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_114_360G1_scaffold_525_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1291..1875)
DNA (585bp) protein (195aa)
Sigma-70 region 2 n=6 Tax=root RepID=B0G6E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23120.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Sigma-70 region 2.
L3_114_360G1_scaffold_525_4
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1892..2311)
DNA (420bp) protein (140aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23121.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Protein of unknown function (DUF3268).
L3_114_360G1_scaffold_525_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2563..2820)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=root RepID=B0G6E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46708.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
L3_114_360G1_scaffold_525_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3240..6872)
DNA (3633bp) protein (1211aa)
Uncharacterized protein n=6 Tax=root RepID=V8C6U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23123.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Cna protein B-type domain.
L3_114_360G1_scaffold_525_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6929..10126)
DNA (3198bp) protein (1066aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23124.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_114_360G1_scaffold_525_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10123..10743)
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0G6F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96963.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_114_360G1_scaffold_525_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10754..12445)
DNA (1692bp) protein (564aa)
Transglycosylase SLT domain protein n=4 Tax=Clostridiales RepID=B0G6F3_9FIRM
Transglycosylase SLT domain protein {ECO:0000313|EMBL:ERI96964.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_114_360G1_scaffold_525_10
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12447..13355)
DNA (909bp) protein (303aa)
Uncharacterized protein n=5 Tax=root RepID=B0G6F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96965.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_114_360G1_scaffold_525_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13371..14081)
DNA (711bp) protein (237aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23128.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_114_360G1_scaffold_525_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14100..14477)
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23129.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_114_360G1_scaffold_525_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14917..15237
DNA (321bp) protein (107aa)
DNA-binding helix-turn-helix protein n=5 Tax=Clostridiales RepID=B0G6F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23130.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
transcriptional regulator
L3_114_360G1_scaffold_525_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15393..16106
DNA (714bp) protein (238aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23131.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_114_360G1_scaffold_525_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16192..16521
DNA (330bp) protein (110aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23132.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Protein of unknown function (DUF1648).
L3_114_360G1_scaffold_525_16
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16583..16816
DNA (234bp) protein (78aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96972.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_114_360G1_scaffold_525_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16839..17255
DNA (417bp) protein (139aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23134.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_114_360G1_scaffold_525_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17481..17732
DNA (252bp) protein (84aa)
Response regulator receiver domain protein n=6 Tax=root RepID=B0G6G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23135.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
two-component response regulator
L3_114_360G1_scaffold_525_19
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17826..18155
DNA (330bp) protein (110aa)
Response regulator receiver domain protein n=6 Tax=root RepID=B0G6G3_9FIRM
Putative transcriptional regulatory protein BasR {ECO:0000313|EMBL:ERI96974.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
response regulator
L3_114_360G1_scaffold_525_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18128..19381
DNA (1254bp) protein (418aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=Clostridiales RepID=B0G6G4_9FIRM
hypothetical protein
L3_114_360G1_scaffold_525_21
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19456..20148
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridiales RepID=B0G6G5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG88117.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ABC transporter ATP-binding protein
L3_114_360G1_scaffold_525_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20148..22610
DNA (2463bp) protein (821aa)
Efflux ABC transporter, permease protein n=4 Tax=root RepID=B0G6G6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23138.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type transport system, permease
L3_114_360G1_scaffold_525_23
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23106..24032)
DNA (927bp) protein (309aa)
Uncharacterized protein n=5 Tax=root RepID=B0G6G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46728.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_114_360G1_scaffold_525_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24049..26019)
DNA (1971bp) protein (657aa)
TraG/TraD family protein n=2 Tax=Clostridiales RepID=R7G2V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23140.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Type IV secretory pathway, VirD4 components
L3_114_360G1_scaffold_525_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26009..27115)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R7G3H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23141.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_114_360G1_scaffold_525_26
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27225..27926)
DNA (702bp) protein (234aa)
Uncharacterized protein n=4 Tax=root RepID=B0G6H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88112.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L3_114_360G1_scaffold_525_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27933..28460)
DNA (528bp) protein (176aa)
Uncharacterized protein n=5 Tax=root RepID=B0G6H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23143.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_114_360G1_scaffold_525_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28789..29637)
DNA (849bp) protein (283aa)
Transcriptional regulator, MerR family n=3 Tax=Clostridiales RepID=B0G6H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23144.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
putative MerR family transcriptional regulator
L3_114_360G1_scaffold_525_29
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29770..30300)
DNA (531bp) protein (177aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46734.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L3_114_360G1_scaffold_525_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30303..31478)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8C8R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23146.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
Displaying items 1-30 of 43 in total

View Taxonomy