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L3_114_360G1_scaffold_530

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_530_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(233..745)
DNA (513bp) protein (171aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BX44_CLOSY
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERI76393.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Transcriptional regulators
L3_114_360G1_scaffold_530_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1036..2913
DNA (1878bp) protein (626aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Clostridium symbiosum RepID=E9SNY2_CLOSY
L3_114_360G1_scaffold_530_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3289..4695
DNA (1407bp) protein (469aa)
Amidohydrolase family protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BVW2_CLOSY
Amidohydrolase family protein {ECO:0000313|EMBL:ERI76390.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
amidohydrolase
L3_114_360G1_scaffold_530_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4724..5740
DNA (1017bp) protein (339aa)
Asparaginase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BE30_CLOSY
Asparaginase {ECO:0000313|EMBL:ERI76389.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
L3_114_360G1_scaffold_530_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5815..7365
DNA (1551bp) protein (517aa)
AbgT transporter family protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BX40_CLOSY
AbgT transporter family protein {ECO:0000313|EMBL:ERI76388.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
aminobenzoyl-glutamate transporter
L3_114_360G1_scaffold_530_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7426..8385
DNA (960bp) protein (320aa)
LysR substrate binding domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D4G3_CLOSY
LysR substrate binding domain protein {ECO:0000313|EMBL:ERI76387.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Transcriptional regulator
L3_114_360G1_scaffold_530_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8690..9904
DNA (1215bp) protein (405aa)
Basic membrane lipoprotein n=4 Tax=Clostridium RepID=E7GQA4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07909.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
basic membrane lipoprotein
L3_114_360G1_scaffold_530_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10131..11723
DNA (1593bp) protein (531aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium symbiosum RepID=U2BE24_CLOSY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI76384.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC transporter
L3_114_360G1_scaffold_530_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11720..12796
DNA (1077bp) protein (359aa)
Branched-chain amino acid ABC transporter, permease protein n=4 Tax=Clostridium RepID=E9SNZ0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07911.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
inner-membrane translocator
L3_114_360G1_scaffold_530_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12793..13755
DNA (963bp) protein (321aa)
Branched-chain amino acid ABC transporter, permease protein n=4 Tax=Clostridium RepID=E9SNZ1_CLOSY
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ERI76382.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
inner-membrane translocator
L3_114_360G1_scaffold_530_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13991..14119
DNA (129bp) protein (43aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07913.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_360G1_scaffold_530_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14071..16902
DNA (2832bp) protein (944aa)
UvrABC system protein A n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DA25_CLOSY
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
excinuclease ABC, A subunit
L3_114_360G1_scaffold_530_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17649..19190
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D4K5_CLOSY
L3_114_360G1_scaffold_530_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19492..19797)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DA70_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76441.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_114_360G1_scaffold_530_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19798..19959)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=U2BW12_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76440.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_114_360G1_scaffold_530_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20147..20944)
DNA (798bp) protein (266aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=3 Tax=Clostridium RepID=E9SNZ5_CLOSY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EHF07917.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_360G1_scaffold_530_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21008..21304)
DNA (297bp) protein (99aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SNZ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93033.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_114_360G1_scaffold_530_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21318..21977)
DNA (660bp) protein (220aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D4K0_CLOSY
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERI76437.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_114_360G1_scaffold_530_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21970..22653)
DNA (684bp) protein (228aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DA64_CLOSY
L3_114_360G1_scaffold_530_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22640..23464)
DNA (825bp) protein (275aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BW08_CLOSY
L3_114_360G1_scaffold_530_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23513..24049)
DNA (537bp) protein (179aa)
ThiW protein n=3 Tax=Clostridium RepID=E7GQJ0_CLOSY
ThiW protein {ECO:0000313|EMBL:EGA93037.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
thiW protein
L3_114_360G1_scaffold_530_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24676..25266
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BE95_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76459.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Abortive phage infection protein
L3_114_360G1_scaffold_530_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25269..25838
DNA (570bp) protein (190aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9SP01_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93038.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Abortive phage infection protein
L3_114_360G1_scaffold_530_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25844..26065
DNA (222bp) protein (74aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D4M0_CLOSY
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI76457.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Hypothetical protein
L3_114_360G1_scaffold_530_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26164..26622)
DNA (459bp) protein (153aa)
Glyoxalase family protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DA85_CLOSY
Glyoxalase family protein {ECO:0000313|EMBL:ERI76456.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L3_114_360G1_scaffold_530_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26662..27495)
DNA (834bp) protein (278aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BW25_CLOSY
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI76455.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Transcriptional regulator, AraC family
L3_114_360G1_scaffold_530_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27629..28744)
DNA (1116bp) protein (372aa)
Bacterial extracellular solute-binding protein, family 7 n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BE91_CLOSY
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:ERI76454.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
sialic acid-binding periplasmic protein siaP
L3_114_360G1_scaffold_530_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28855..29604)
DNA (750bp) protein (250aa)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BXA7_CLOSY
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ERI76453.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
3-oxoacyl-ACP synthase
L3_114_360G1_scaffold_530_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29636..30454)
DNA (819bp) protein (273aa)
AP endonuclease, family 2 n=3 Tax=Clostridium RepID=E9SP08_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93044.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
IolE; sugar phosphate isomerase
L3_114_360G1_scaffold_530_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30844..31503
DNA (660bp) protein (220aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DA79_CLOSY
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI76451.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
transcriptional regulator
Displaying items 1-30 of 41 in total

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