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L3_114_360G1_scaffold_531

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_531_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

L3_114_360G1_scaffold_531_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(425..1411)
DNA (987bp) protein (329aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D9D9_CLOSY
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERI76121.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
GntR family transcriptional regulator
L3_114_360G1_scaffold_531_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1924..2388
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9I4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06926.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
TspO and MBR-like protein
L3_114_360G1_scaffold_531_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2802..3584
DNA (783bp) protein (261aa)
HAD-superfamily hydrolase n=4 Tax=Clostridium RepID=E7GTG3_CLOSY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EGA91944.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
HAD-superfamily hydrolase, subfamily IIB
L3_114_360G1_scaffold_531_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3605..3886)
DNA (282bp) protein (94aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9STN6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06870.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_114_360G1_scaffold_531_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4312..4563)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BD96_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76114.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_531_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4766..5089)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BWC1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76113.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_531_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5209..5448
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D3P7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76112.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_114_360G1_scaffold_531_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5445..6884)
DNA (1440bp) protein (480aa)
Trk system potassium uptake protein TrkH n=3 Tax=Clostridium RepID=E7GTF8_CLOSY
Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:EGA91939.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Trk-type K+ transport systems, membrane components
L3_114_360G1_scaffold_531_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6899..8257)
DNA (1359bp) protein (453aa)
TrkA N-terminal domain protein n=3 Tax=Clostridium symbiosum RepID=E9STN2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91938.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
K+ transport systems, NAD-binding component
L3_114_360G1_scaffold_531_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8542..9762)
DNA (1221bp) protein (407aa)
opuAA; Glycine betaine transport ATP-binding protein OpuAA (EC:3.6.3.32)
Putative glycine betaine/L-proline transport ATP-binding protein proV n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BD91_CLOSY
Putative glycine betaine/L-proline transport ATP-binding protein proV {ECO:0000313|EMBL:ERI76109.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_114_360G1_scaffold_531_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9749..11626)
DNA (1878bp) protein (626aa)
ABC transporter, substrate-binding protein, QAT family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BWB7_CLOSY
ABC transporter, substrate-binding protein, QAT family {ECO:0000313|EMBL:ERI76108.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC transporter permease
L3_114_360G1_scaffold_531_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12163..12600
DNA (438bp) protein (146aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D3P2_CLOSY
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERI76107.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
regulatory protein MarR
L3_114_360G1_scaffold_531_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12593..13924
DNA (1332bp) protein (444aa)
MATE efflux family protein n=2 Tax=Clostridium symbiosum RepID=U2D9C2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91934.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
MATE efflux family protein
L3_114_360G1_scaffold_531_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13978..15033
DNA (1056bp) protein (352aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BV34_CLOSY
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERI76105.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted hydrolase (metallo-beta-lactamase superfamily)
L3_114_360G1_scaffold_531_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15166..15324)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9STM6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91932.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_360G1_scaffold_531_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15752..15922)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9K0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06882.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_114_360G1_scaffold_531_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16012..16620)
DNA (609bp) protein (203aa)
CotJC protein n=2 Tax=Clostridium symbiosum RepID=U2BWB1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91931.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Mn-containing catalase
L3_114_360G1_scaffold_531_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16624..16878)
DNA (255bp) protein (85aa)
Spore coat peptide assembly protein cotJB n=4 Tax=Clostridium RepID=E7GTE9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06884.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_114_360G1_scaffold_531_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16879..17436)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GTE8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91929.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_114_360G1_scaffold_531_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17735..18157)
DNA (423bp) protein (141aa)
CBS domain protein n=4 Tax=Clostridium RepID=E9STM2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06886.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_114_360G1_scaffold_531_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18295..18888)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9STM1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06887.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Uncharacterised ACR, YkgG family COG1556.
L3_114_360G1_scaffold_531_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19110..19883)
DNA (774bp) protein (258aa)
Peptidase, M23 family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9STM0_CLOSY
Peptidase, M23 family {ECO:0000313|EMBL:ERI76095.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
peptidase M23
L3_114_360G1_scaffold_531_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19924..20838)
DNA (915bp) protein (305aa)
Stage II sporulation protein D n=4 Tax=Clostridium RepID=E7GTE4_CLOSY
Stage II sporulation protein D {ECO:0000313|EMBL:EGA91925.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
SpoIID/LytB domain-containing protein
L3_114_360G1_scaffold_531_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20961..21497)
DNA (537bp) protein (179aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9STL8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91924.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_114_360G1_scaffold_531_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21498..23951)
DNA (2454bp) protein (818aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=3 Tax=Clostridium symbiosum RepID=E7GTE2_CLOSY
L3_114_360G1_scaffold_531_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23967..27107)
DNA (3141bp) protein (1047aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D9A7_CLOSY
L3_114_360G1_scaffold_531_28
unknown

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comp(27313..27462)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_114_360G1_scaffold_531_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27489..27593)
DNA (105bp) protein (35aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F9L1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06893.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_114_360G1_scaffold_531_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27783..29243
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=4 Tax=Clostridium RepID=U2BV17_CLOSY
Displaying items 1-30 of 40 in total

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