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L3_114_360G1_scaffold_1550

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_1550_1
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..301
DNA (300bp) protein (100aa)
hypothetical protein, partial n=1 Tax=Blautia producta RepID=UPI000382E1F7
Uncharacterized protein {ECO:0000313|EMBL:EET59466.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L3_114_360G1_scaffold_1550_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

686..1843
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77781.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_114_360G1_scaffold_1550_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1840..2115
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LK26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98813.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_114_360G1_scaffold_1550_4
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2108..2296
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA06_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08499.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L3_114_360G1_scaffold_1550_5
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2293..2514
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DBV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87890.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L3_114_360G1_scaffold_1550_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2527..2754
DNA (228bp) protein (76aa)
hypothetical protein, partial n=1 Tax=Blautia producta RepID=UPI000380E02E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ67820.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_114_360G1_scaffold_1550_7
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2834..3121
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037979FD
Uncharacterized protein {ECO:0000313|EMBL:EOS78941.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L3_114_360G1_scaffold_1550_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3172..4209
DNA (1038bp) protein (346aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CBL14283.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CBL14283.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003660AC2
L3_114_360G1_scaffold_1550_9
unknown

Not on your lists

comp(4522..4749)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000363C082
L3_114_360G1_scaffold_1550_10
unknown

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comp(4816..5001)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036EBC88
L3_114_360G1_scaffold_1550_11
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5268..6368)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036D1A0B
Uncharacterized protein {ECO:0000313|EMBL:EOS72542.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Site-specific recombinase XerD
L3_114_360G1_scaffold_1550_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6520..7692)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42072.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
cytoplasmic protein
L3_114_360G1_scaffold_1550_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7745..8167)
DNA (423bp) protein (141aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5U9_9FIRM
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EKY23359.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L3_114_360G1_scaffold_1550_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8174..8590)
DNA (417bp) protein (139aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KP72_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDK23754.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
putative Xre family DNA-binding protein
L3_114_360G1_scaffold_1550_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8794..8982
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0BPP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66380.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
XRE family transcriptional regulator
L3_114_360G1_scaffold_1550_16
unknown

Not on your lists

9000..9143
DNA (144bp) protein (48aa)

This feature has no annotations

L3_114_360G1_scaffold_1550_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9140..9418)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Clostridium beijerinckii RepID=A6M3C1_CLOB8
hypothetical protein
Putative SinR-like protein {ECO:0000313|EMBL:CAB60194.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_114_360G1_scaffold_1550_18
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9509..9736
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000360AB42
50S ribosomal protein L11 domain protein {ECO:0000313|EMBL:CDC34434.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L3_114_360G1_scaffold_1550_19
unknown

Not on your lists

9736..9945
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036AFAE0
L3_114_360G1_scaffold_1550_20
unknown

Not on your lists

9986..10162
DNA (177bp) protein (59aa)

This feature has no annotations

L3_114_360G1_scaffold_1550_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10155..10370
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NG20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11053.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
L3_114_360G1_scaffold_1550_22
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10535..11254
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AAS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85244.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
L3_114_360G1_scaffold_1550_23
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11256..11687
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NIR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC11050.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
rnhA; ribonuclease H
L3_114_360G1_scaffold_1550_24
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11680..12216
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JVB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38038.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_114_360G1_scaffold_1550_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12213..12812
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WIJ6_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY83478.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_114_360G1_scaffold_1550_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12809..14179
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WIJ6_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY83478.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_114_360G1_scaffold_1550_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14192..15412
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9UZ16_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY83479.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_114_360G1_scaffold_1550_28
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15402..15728
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NJZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80282.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L3_114_360G1_scaffold_1550_29
unknown

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15737..15985
DNA (249bp) protein (83aa)

This feature has no annotations

L3_114_360G1_scaffold_1550_30
unknown

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16078..16308
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

View Taxonomy