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L3_114_360G1_scaffold_1611

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_1611_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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69..1244
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A6R0_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN82493.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
cpsF; rhamnosyltransferase
L3_114_360G1_scaffold_1611_2
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1310..2272
DNA (963bp) protein (321aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS73929.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS73929.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4F8_9FIRM
wchV; glycosyltransferase WchA
L3_114_360G1_scaffold_1611_3
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2275..3468
DNA (1194bp) protein (398aa)
oligosaccharide repeat unit polymerase Wzy n=1 Tax=Lactobacillus vini RepID=UPI000299EEF6
cpsH; oligosaccharide repeat unit polymerase
Uncharacterized protein {ECO:0000313|EMBL:EHR34513.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_114_360G1_scaffold_1611_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3491..4621
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TDG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC71458.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_114_360G1_scaffold_1611_5
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4649..5941
DNA (1293bp) protein (431aa)
Conserved domain protein n=2 Tax=Bacteroidetes RepID=F3XXS9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH00654.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_114_360G1_scaffold_1611_6
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5928..7352
DNA (1425bp) protein (475aa)
Flippase Wzx n=1 Tax=Streptococcus pneumoniae RepID=Q4K1F1_STREE
Flippase Wzx {ECO:0000313|EMBL:CEO79693.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
hypothetical protein
L3_114_360G1_scaffold_1611_7
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7775..8305
DNA (531bp) protein (177aa)
Cytidylyltransferase n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QWF5_9BACT
Cytidylyltransferase {ECO:0000313|EMBL:EGG52037.1}; TaxID=762982 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
hypothetical protein
L3_114_360G1_scaffold_1611_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8365..9063
DNA (699bp) protein (233aa)
Cytidylyltransferase {ECO:0000313|EMBL:EEQ58032.1}; EC=2.7.7.- {ECO:0000313|EMBL:EEQ58032.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Cytidylyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJX3_9FIRM
acylneuraminate cytidylyltransferase
L3_114_360G1_scaffold_1611_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10398..10622)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PH08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67101.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_114_360G1_scaffold_1611_10
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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10725..11093
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JRB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36749.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_114_360G1_scaffold_1611_11
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11221..12168)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SQQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP27043.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
4Fe-4S ferredoxin
L3_114_360G1_scaffold_1611_12
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12233..13921)
DNA (1689bp) protein (563aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JYC6_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDB63854.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_114_360G1_scaffold_1611_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13905..14993)
DNA (1089bp) protein (363aa)
Polysaccharide pyruvyl transferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPV4_9FIRM
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:CCX82310.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Polysaccharide pyruvyl transferase.
L3_114_360G1_scaffold_1611_14
unknown

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comp(15043..16218)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00030CE1B7
L3_114_360G1_scaffold_1611_15
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(16313..17347)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X2V5_NITSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV47238.1}; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifractor.;" source="Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1).;"
L3_114_360G1_scaffold_1611_16
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17347..18408)
DNA (1062bp) protein (354aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1JXJ9_9BACE
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEZ22708.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
epimerase/dehydratase
L3_114_360G1_scaffold_1611_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18449..19165)
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FDY6_9CLOT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_114_360G1_scaffold_1611_18
Streptococcus thermophilus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(19162..19899)
DNA (738bp) protein (246aa)
Eps4G n=1 Tax=Streptococcus thermophilus PF3_STRTR">RepID=Q8GPF3_STRTR
Eps4G {ECO:0000313|EMBL:AAN63683.1}; TaxID=1308 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus thermophilus.;"
WciO
L3_114_360G1_scaffold_1611_19
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19927..21090)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FIL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE14313.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
L3_114_360G1_scaffold_1611_20
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21074..22258)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58657.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
cpsO; polysaccharide pyruvyl transferase
L3_114_360G1_scaffold_1611_21
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22255..23499)
DNA (1245bp) protein (415aa)
Eps4F n=1 Tax=Roseburia sp. CAG:303 RepID=R7IZR6_9FIRM
Eps4F {ECO:0000313|EMBL:CDE56112.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
Displaying 21 items

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