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L3_114_360G1_scaffold_1827

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_1827_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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173..1045
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YMG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09002.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_114_360G1_scaffold_1827_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1058..1465
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X112_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09001.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_114_360G1_scaffold_1827_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2033..3343
DNA (1311bp) protein (437aa)
Nucleotidyltransferase domain protein (Fragment) n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGV8_9FIRM
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EEU98974.1}; Flags: Fragment;; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Nucleotidyltransferase domain.
L3_114_360G1_scaffold_1827_4
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3349..3552
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HIJ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82597.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_114_360G1_scaffold_1827_5
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3901..4119
DNA (219bp) protein (73aa)
Putative transcriptional regulator n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NJ92_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CCZ04235.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L3_114_360G1_scaffold_1827_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4173..7613
DNA (3441bp) protein (1147aa)
UPI0003D627F5 related cluster n=1 Tax=unknown RepID=UPI0003D627F5
Reticulocyte binding protein {ECO:0000313|EMBL:ETI90859.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_114_360G1_scaffold_1827_7

Not on your lists

7627..8070
DNA (444bp) protein (148aa)
Response regulator n=1 Tax=uncultured bacterium RepID=K2BQE3_9BACT
Response regulator {ECO:0000313|EMBL:EKD71058.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Response regulator receiver protein
L3_114_360G1_scaffold_1827_8

Not on your lists

8082..9323
DNA (1242bp) protein (414aa)
Phosphorylase family n=1 Tax=uncultured bacterium RepID=K2BAF7_9BACT
Phosphorylase family {ECO:0000313|EMBL:EKD71057.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
response regulator receiver protein
L3_114_360G1_scaffold_1827_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9457..10278)
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E477_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90217.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_114_360G1_scaffold_1827_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10349..10735)
DNA (387bp) protein (129aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGV5_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EEU98971.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Relaxase/Mobilisation nuclease domain.
L3_114_360G1_scaffold_1827_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10763..11710)
DNA (948bp) protein (316aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0Y3_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL13273.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_114_360G1_scaffold_1827_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11659..12000)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YXJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12502.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Bacterial mobilisation protein (MobC).
L3_114_360G1_scaffold_1827_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12569..13087
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R6SQ57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX69673.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
ECF subfamily RNA polymerase sigma-70 factor
L3_114_360G1_scaffold_1827_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13077..13838
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C0FQK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95113.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_114_360G1_scaffold_1827_15
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13822..14697
DNA (876bp) protein (292aa)
ABC-2 type transport system ATP-binding protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2D3_EUBE2
ABC transporter ATP-binding protein
ABC-2 type transport system ATP-binding protein {ECO:0000313|EMBL:ACR72508.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_1827_16
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14699..15886
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2D2_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72507.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_114_360G1_scaffold_1827_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16027..16944
DNA (918bp) protein (306aa)
ABC transporter permease {ECO:0000313|EMBL:CKH15003.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH15003.1};; ABC-type transport system, permeaseTn1549-like,CTn5-Orf33 {ECO:0000313|EMBL:CEK00068.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
FtsX-like permease family protein n=1 Tax=Clostridium difficile P29 RepID=T4NDH4_CLODI
vexP1; ABC transporter permease
Displaying 17 items

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