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L3_114_360G1_scaffold_1513

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_114_360G1_scaffold_1513_1
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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593..2056
DNA (1464bp) protein (488aa)
Polyphosphate:AMP phosphotransferase n=2 Tax=Coprococcus RepID=C0BBA2_9FIRM
Polyphosphate:AMP phosphotransferase {ECO:0000313|EMBL:CDB84317.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L3_114_360G1_scaffold_1513_2
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2060..3064
DNA (1005bp) protein (335aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=2 Tax=Coprococcus RepID=R6LQ08_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L3_114_360G1_scaffold_1513_3
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3149..4924
DNA (1776bp) protein (592aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LER1_9FIRM
L3_114_360G1_scaffold_1513_4
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4964..6079
DNA (1116bp) protein (372aa)
RNA polymerase sigma factor SigA n=2 Tax=Coprococcus RepID=C0BBA6_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
RNA polymerase, sigma 70 subunit, RpoD
L3_114_360G1_scaffold_1513_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6084..6800
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BBA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84313.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Predicted SAM-dependent methyltransferase
L3_114_360G1_scaffold_1513_6
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6808..7608
DNA (801bp) protein (267aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Dorea RepID=A6BEL0_9FIRM
conserved hypothetical protein TIGR00486
L3_114_360G1_scaffold_1513_7
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7679..9352
DNA (1674bp) protein (558aa)
Uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase family protein n=2 Tax=Coprococcus RepID=C0BBA9_9FIRM
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:CDB84311.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L3_114_360G1_scaffold_1513_8
unknown

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9483..9635
DNA (153bp) protein (51aa)

This feature has no annotations

L3_114_360G1_scaffold_1513_9
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9601..10509)
DNA (909bp) protein (303aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=2 Tax=Coprococcus RepID=C0BBB0_9FIRM
L3_114_360G1_scaffold_1513_10
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10485..12368)
DNA (1884bp) protein (628aa)
ABC transporter, solute-binding protein n=2 Tax=Coprococcus RepID=C0BBB1_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG89385.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Spermidine/putrescine-binding periplasmic protein
L3_114_360G1_scaffold_1513_11
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12368..13111)
DNA (744bp) protein (248aa)
ABC transporter, permease protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BBB2_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG89386.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_114_360G1_scaffold_1513_12
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13176..14249)
DNA (1074bp) protein (358aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
Polyamine ABC transporter ATP-binding protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6MEA6_9FIRM
L3_114_360G1_scaffold_1513_13
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14271..14810)
DNA (540bp) protein (180aa)
Cupin domain protein n=2 Tax=Coprococcus RepID=C0BBB4_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDB84306.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
XRE family transcriptional regulator
Displaying 13 items

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