ggKbase home page

L3_121_000G1_scaffold_20252

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_20252_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20..460
DNA (441bp) protein (147aa)
Predicted major pilin subunit n=29 Tax=Escherichia coli RepID=C8U1H8_ECO10
ppdD_hcpA; major pilin subunit
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:ESD23456.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_121_000G1_scaffold_20252_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

470..730
DNA (261bp) protein (87aa)
Type II/IV secretion system family protein n=2 Tax=Escherichia coli RepID=N2X1D6_ECOLX
hypothetical protein
Transport protein HofB {ECO:0000313|EMBL:EKJ28054.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L3_121_000G1_scaffold_20252_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

684..1820
DNA (1137bp) protein (379aa)
GspE family protein HofB n=139 Tax=Enterobacteriaceae RepID=A7ZW57_ECOHS
hofB_hcpB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE56361.1}; TaxID=1446549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O118:H16 str. 2009C-4446.;"
L3_121_000G1_scaffold_20252_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1810..2451
DNA (642bp) protein (214aa)
Protein transporter hofC n=2 Tax=Escherichia coli RepID=T6C836_ECOLX
type IV pilin biogenesis protein
Type II secretion system (T2SS), F family protein {ECO:0000313|EMBL:ENA11072.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
L3_121_000G1_scaffold_20252_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2417..2884
DNA (468bp) protein (156aa)
Type II secretion system (T2SS), F family protein n=2 Tax=Escherichia coli RepID=N3EHG4_ECOLX
hofC_hcpA; assembly protein HofC in type IV pilin biogenesis, transmembrane protein
Type IV fimbrial assembly protein PilC {ECO:0000313|EMBL:CDL29675.1}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
Displaying 5 items

View Taxonomy