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L3_121_000G1_scaffold_2647

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Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_2647_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..1201
DNA (1200bp) protein (400aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Carbamoyl-phosphate synthase small chain n=2 Tax=Bifidobacterium RepID=R5GPP4_9BIFI
carbamoyl phosphate synthase small subunit
L3_121_000G1_scaffold_2647_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1194..4574
DNA (3381bp) protein (1127aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Carbamoyl-phosphate synthase large chain n=2 Tax=Bifidobacterium RepID=A7A4T6_BIFAD
carbamoyl-phosphate synthase large chain
L3_121_000G1_scaffold_2647_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4574..5515
DNA (942bp) protein (314aa)
Similar to orotidine 5'-phosphate decarboxylase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3L7_9BIFI
orotidine 5'-phosphate decarboxylase
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:AII75974.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_2647_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5576..6163
DNA (588bp) protein (196aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Guanylate kinase n=2 Tax=Bifidobacterium RepID=A7A4T8_BIFAD
guanylate kinase
L3_121_000G1_scaffold_2647_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6251..7765)
DNA (1515bp) protein (505aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Dihydroxy-acid dehydratase n=2 Tax=Bifidobacterium adolescentis RepID=ILVD_BIFAA
dihydroxy-acid dehydratase
L3_121_000G1_scaffold_2647_6
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8215..8499
DNA (285bp) protein (95aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
DNA-directed RNA polymerase subunit omega n=4 Tax=root RepID=RPOZ_BIFAA
L3_121_000G1_scaffold_2647_7
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8673..9887
DNA (1215bp) protein (405aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
S-adenosylmethionine synthase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H347_9BIFI
S-adenosylmethionine synthetase
L3_121_000G1_scaffold_2647_8
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9928..12177
DNA (2250bp) protein (750aa)
Probable primosomal protein N n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3L0_9BIFI
Primosome assembly protein PriA {ECO:0000313|EMBL:KFI96722.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
primosome assembly protein PriA
L3_121_000G1_scaffold_2647_9
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12282..12965
DNA (684bp) protein (228aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XXG9_9BIFI
HAD family hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAR01513.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L3_121_000G1_scaffold_2647_10
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13082..14044
DNA (963bp) protein (321aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Methionyl-tRNA formyltransferase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3J6_9BIFI
methionyl-tRNA formyltransferase
L3_121_000G1_scaffold_2647_11
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14196..14879)
DNA (684bp) protein (228aa)
Phosphoserine phosphatase {ECO:0000313|EMBL:KFI96725.1}; EC=3.1.3.3 {ECO:0000313|EMBL:KFI96725.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Phosphoserine phosphatase SerB n=2 Tax=Bifidobacterium RepID=A7A4U5_BIFAD
putative phosphoserine phosphatase
L3_121_000G1_scaffold_2647_12
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14932..16500
DNA (1569bp) protein (523aa)
AAA ATPase forming ring-shaped complexes n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H329_9BIFI
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative Aaa-family ATPase
L3_121_000G1_scaffold_2647_13
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16572..18155
DNA (1584bp) protein (528aa)
Proteasome-associated protein {ECO:0000313|EMBL:KFI96727.1}; EC=6.3.2.- {ECO:0000313|EMBL:KFI96727.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Hypothetical proteasome-associated protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0U5_BIFAA
proteasome-associated protein
L3_121_000G1_scaffold_2647_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18290..19120
DNA (831bp) protein (277aa)
Inositol monophosphatase family protein n=2 Tax=Bifidobacterium RepID=A7A4U8_BIFAD
putative inositol monophosphatase
Inositol monophosphatase family protein {ECO:0000313|EMBL:EDN83931.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_121_000G1_scaffold_2647_15
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19164..19406
DNA (243bp) protein (81aa)
Prokaryotic ubiquitin-like protein Pup n=3 Tax=Bifidobacterium RepID=PUP_BIFAA
Ubiquitin-like protein Pup {ECO:0000313|EMBL:EDN83932.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Prokaryotic ubiquitin-like protein Pup
L3_121_000G1_scaffold_2647_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19406..20872
DNA (1467bp) protein (489aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Pup--protein ligase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4V0_BIFAD
proteasome-associated protein
L3_121_000G1_scaffold_2647_17
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20946..21746)
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A0U8_BIFAA
putative 2-keto-3-deoxy-6-phosphogluconate aldolase
2-keto-3-deoxy-6-phosphogluconate aldolase {ECO:0000313|EMBL:KFI96731.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_121_000G1_scaffold_2647_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21743..22102)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4V2_BIFAD
hypothetical protein
MarR family transcriptional regulator {ECO:0000313|EMBL:KIM01948.1}; Uncharacterized protein {ECO:0000313|EMBL:AII75989.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_2647_19
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22246..22449)
DNA (204bp) protein (68aa)
DNA-binding protein HB1 n=10 Tax=Bifidobacterium RepID=A1A0V0_BIFAA
DNA-binding protein HU
DNA-binding protein HB1 {ECO:0000313|EMBL:KFI96733.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_121_000G1_scaffold_2647_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22548..24983)
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4V4_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:AII75991.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_121_000G1_scaffold_2647_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25131..26573)
DNA (1443bp) protein (481aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:KIM01961.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KIM01961.1};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Lyase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4V5_BIFAD
adenylosuccinate lyase
L3_121_000G1_scaffold_2647_22
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26613..27767)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4V6_BIFAD
Esterase/lipase {ECO:0000313|EMBL:KFI96736.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_121_000G1_scaffold_2647_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28645..29217)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4V9_BIFAD
cell surface elastin binding protein EbpS
Cell surface elastin binding protein EbpS {ECO:0000313|EMBL:AJE05575.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_2647_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29214..30233)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0V6_BIFAA
hypothetical protein
von Willebrand factor A {ECO:0000313|EMBL:KFI96738.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_121_000G1_scaffold_2647_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30230..31297)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4W1_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN83944.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_121_000G1_scaffold_2647_26
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31298..31822)
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0V8_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:KFI96740.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_121_000G1_scaffold_2647_27
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31819..32772)
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4W3_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI96741.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_121_000G1_scaffold_2647_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32769..33785)
DNA (1017bp) protein (339aa)
Widely conserved MoxR-like protein in magnesium chelatase family n=2 Tax=Bifidobacterium RepID=R5GPJ4_9BIFI
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDN83947.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
MoxR-like protein in magnesium chelatase family
L3_121_000G1_scaffold_2647_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33855..34607)
DNA (753bp) protein (251aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Uracil-DNA glycosylase n=2 Tax=Bifidobacterium RepID=A1A0W1_BIFAA
ung; uracil-DNA glycosylase
L3_121_000G1_scaffold_2647_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34712..35410
DNA (699bp) protein (233aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0W2_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76001.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 79 in total

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