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L3_121_000G1_scaffold_1019

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_1019_1
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105..374)
DNA (270bp) protein (90aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H1F8_9BIFI
D-tyrosyl-tRNA(Tyr) deacylase
L3_121_000G1_scaffold_1019_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(371..532)
DNA (162bp) protein (54aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A806_BIFAD
D-tyrosyl-tRNA(Tyr) deacylase
L3_121_000G1_scaffold_1019_3
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(550..954)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q587_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR02048.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L3_121_000G1_scaffold_1019_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1180..2040)
DNA (861bp) protein (287aa)
LacI-type transcriptional regulator n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A218_BIFAA
LacI-type transcriptional regulator {ECO:0000313|EMBL:KFI98122.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
LacI-type transcriptional regulator
L3_121_000G1_scaffold_1019_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2462..4255
DNA (1794bp) protein (598aa)
Probable alpha-1,4-glucosidase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A219_BIFAA
aglA; alpha-1,4-glucosidase
Probable alpha-1,4-glucosidase {ECO:0000313|EMBL:BAF39752.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_121_000G1_scaffold_1019_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4309..5676
DNA (1368bp) protein (456aa)
Possible solute binding protein of ABC transporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A220_BIFAA
ABC transporter substrate-binding protein
Possible solute binding protein of ABC transporter {ECO:0000313|EMBL:BAF39753.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_121_000G1_scaffold_1019_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5796..6260
DNA (465bp) protein (155aa)
Probable D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000256|SAAS:SAAS00160053}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00012979};; Probable D-tyrosyl-tRNA(Tyr) deacylase 2 {ECO:0000256|SAAS:SAAS00160044}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A221_BIFAA
D-tyrosyl-tRNA(Tyr) deacylase
L3_121_000G1_scaffold_1019_8
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6454..6714
DNA (261bp) protein (87aa)
DNA-damage-inducible protein J n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=D3R7P7_BIFAB
DNA-damage-inducible protein J {ECO:0000313|EMBL:KFI98118.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_121_000G1_scaffold_1019_9
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6707..6988
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Gardnerella vaginalis 6119V5 RepID=I4MDZ6_GARVA
Addiction module toxin component YafQ {ECO:0000313|EMBL:KFI98117.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_121_000G1_scaffold_1019_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7343..8404)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A222_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39755.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_121_000G1_scaffold_1019_11
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8431..9006
DNA (576bp) protein (192aa)
Transposase n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4QZI5_BIFLM
IS3 family transposase
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29768.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L3_121_000G1_scaffold_1019_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9042..9842
DNA (801bp) protein (267aa)
Truncated transposase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWH4_BIFL1
Transposase {ECO:0000313|EMBL:KEY28223.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
truncated transposase
L3_121_000G1_scaffold_1019_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10187..12235)
DNA (2049bp) protein (683aa)
Helicase C-terminal domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A810_BIFAD
Type I restriction-modification system R subunit {ECO:0000313|EMBL:AII76445.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
type I restriction-modification system R subunit
L3_121_000G1_scaffold_1019_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12239..13642)
DNA (1404bp) protein (468aa)
Helicase C-terminal domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A810_BIFAD
Type I restriction-modification system restriction subunit R
Type I restriction-modification system restriction subunit R {ECO:0000313|EMBL:AJE06085.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_1019_15
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14290..14841)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2ISC8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ENA27910.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
Type I restriction-modification system, specificity subunit S
L3_121_000G1_scaffold_1019_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14834..16312)
DNA (1479bp) protein (493aa)
N-6 DNA Methylase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A814_BIFAD
DNA methyltransferase {ECO:0000313|EMBL:KIM01423.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
type I restriction modification system M subunit
L3_121_000G1_scaffold_1019_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16574..17170)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A816_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KIM01424.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
NERD domain-containing protein
L3_121_000G1_scaffold_1019_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17241..19502
DNA (2262bp) protein (754aa)
SNF2 family N-terminal domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A817_BIFAD
SNF2 family DNA/RNA helicase {ECO:0000313|EMBL:AII76449.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
SNF2 family DNA/RNA helicase
L3_121_000G1_scaffold_1019_19
unknown

Not on your lists

19723..19899
DNA (177bp) protein (59aa)

This feature has no annotations

L3_121_000G1_scaffold_1019_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20609..21442
DNA (834bp) protein (278aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A823_BIFAD
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EDN81888.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
carbon-nitrogen hydrolase
L3_121_000G1_scaffold_1019_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21483..22139)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3X3_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE06095.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_1019_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22433..23185
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A826_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:EDN81891.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L3_121_000G1_scaffold_1019_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23249..23881)
DNA (633bp) protein (211aa)
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:EDN81892.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDN81892.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A827_BIFAD
putative DNA polymerase III epsilon subunit
L3_121_000G1_scaffold_1019_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24017..25381)
DNA (1365bp) protein (455aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Trigger factor n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A828_BIFAD
trigger factor PPIase
L3_121_000G1_scaffold_1019_25
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25434..26729)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GV21_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY19634.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L3_121_000G1_scaffold_1019_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26722..27354)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A238_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:KIM01095.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_121_000G1_scaffold_1019_27
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27542..28384)
DNA (843bp) protein (281aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Pyruvate formate-lyase 1 activating enzyme n=3 Tax=Bifidobacterium RepID=A1A239_BIFAA
pyruvate formate-lyase 1 activating enzyme
L3_121_000G1_scaffold_1019_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28558..28890)
DNA (333bp) protein (111aa)
Formate acetyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A240_BIFAA
pfl; formate acetyltransferase
Formate acetyltransferase {ECO:0000313|EMBL:BAF39773.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_121_000G1_scaffold_1019_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28850..30769)
DNA (1920bp) protein (640aa)
Formate acetyltransferase {ECO:0000313|EMBL:KFI97759.1}; EC=2.3.1.54 {ECO:0000313|EMBL:KFI97759.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Formate acetyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A240_BIFAA
formate acetyltransferase
L3_121_000G1_scaffold_1019_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30918..31127)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A241_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39774.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Displaying items 1-30 of 88 in total

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