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L3_121_000G1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 304 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_22_1
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..495)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z4Y6_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB08430.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
L3_121_000G1_scaffold_22_2
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

879..1544
DNA (666bp) protein (222aa)
Resolvase, N-terminal domain protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTG1_9BACT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDS04182.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Resolvase domain
L3_121_000G1_scaffold_22_3
unknown

Not on your lists

comp(1815..2906)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003602A15
L3_121_000G1_scaffold_22_4
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3021..5435)
DNA (2415bp) protein (805aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036FD010
ABC transporter {ECO:0000313|EMBL:KIO42761.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
copper ABC transporter permease
L3_121_000G1_scaffold_22_5
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5462..6385)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037CA6C4
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIO46092.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
ABC transporter
L3_121_000G1_scaffold_22_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6728..7717)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037AC6C4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98703.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
L3_121_000G1_scaffold_22_7
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7743..9239)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035C5864
Uncharacterized protein {ECO:0000313|EMBL:ETZ24635.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
RagB/SusD domain-containing protein
L3_121_000G1_scaffold_22_8
Prevotella pleuritidis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9258..12842)
DNA (3585bp) protein (1195aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003695422
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:ERK03515.1}; TaxID=1081904 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella pleuritidis F0068.;"
TonB-dependent receptor plug
L3_121_000G1_scaffold_22_9
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12913..14091)
DNA (1179bp) protein (393aa)
Anti-FecI sigma factor, FecR n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z4H9_ODOSD
anti-FecI sigma factor, FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADY32589.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_121_000G1_scaffold_22_10
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14163..14732)
DNA (570bp) protein (190aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FVW4_9PORP
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDB06137.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_121_000G1_scaffold_22_11
unknown

Not on your lists

comp(14781..15056)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_121_000G1_scaffold_22_12
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15125..17695)
DNA (2571bp) protein (857aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037BEDBF
Divergent AAA domain protein {ECO:0000313|EMBL:BAR47739.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
divergent AAA domain-containing protein
L3_121_000G1_scaffold_22_13
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17973..18410
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036B5626
Uncharacterized protein {ECO:0000313|EMBL:EIY60391.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
GNAT family acetyltransferase
L3_121_000G1_scaffold_22_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18407..20275)
DNA (1869bp) protein (623aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000375D812
Thioredoxin {ECO:0000313|EMBL:CDD25876.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Thioredoxin.
L3_121_000G1_scaffold_22_15
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20406..20894
DNA (489bp) protein (163aa)
Ribonuclease H (EC:3.1.26.4)
RNaseH ribonuclease n=1 Tax=Butyricimonas synergistica RepID=UPI00038098F1
Ribonuclease HI {ECO:0000313|EMBL:KIO44579.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_121_000G1_scaffold_22_16
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21003..21971
DNA (969bp) protein (323aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
UDP-glucose 4-epimerase n=1 Tax=Butyricimonas synergistica RepID=UPI00035F5E6E
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KIO44578.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_121_000G1_scaffold_22_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22024..23019)
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7ALG5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84211.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_22_18
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23218..24114
DNA (897bp) protein (299aa)
Transcription regulator AraC family n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6SAL4_9BACE
Transcription regulator AraC family {ECO:0000313|EMBL:CDC52371.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
transcriptional regulator
L3_121_000G1_scaffold_22_19
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24638..26926
DNA (2289bp) protein (763aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000313|EMBL:KIO44576.1}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895, ECO:0000256|SAAS:SAAS00089907};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000365FE62
ribonuclease R
L3_121_000G1_scaffold_22_20
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27063..28196)
DNA (1134bp) protein (378aa)
Alkyl hydroperoxide reductase n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FDH7_9PORP
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:CDB06986.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
alkyl hydroperoxide reductase
L3_121_000G1_scaffold_22_21
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28225..29595)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000360AAD1
Uncharacterized protein {ECO:0000313|EMBL:CDA87200.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
RagB/SusD domain-containing protein
L3_121_000G1_scaffold_22_22
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29614..33045)
DNA (3432bp) protein (1144aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003671940
Uncharacterized protein {ECO:0000313|EMBL:CDA87201.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
membrane protein
L3_121_000G1_scaffold_22_23
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33167..34309)
DNA (1143bp) protein (381aa)
Anti-FecI sigma factor, FecR n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z678_ODOSD
anti-FecI sigma factor, FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADY32751.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
L3_121_000G1_scaffold_22_24
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34388..34963)
DNA (576bp) protein (192aa)
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FID3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KIO44672.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_121_000G1_scaffold_22_25
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35082..35354)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035CFE7F
Uncharacterized protein {ECO:0000313|EMBL:EHP45382.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
hypothetical protein
L3_121_000G1_scaffold_22_26
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35472..36509
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036B33BB
Preprotein translocase SecA subunit {ECO:0000313|EMBL:CCZ10766.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
choloylglycine hydrolase
L3_121_000G1_scaffold_22_27
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36567..37289)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037CD621
Uncharacterized protein {ECO:0000313|EMBL:CCZ80981.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
metal-dependent hydrolase
L3_121_000G1_scaffold_22_28
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37377..38339)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037EEFCD
Uncharacterized protein {ECO:0000313|EMBL:KKB54267.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L3_121_000G1_scaffold_22_29
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39088..40521
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000364BA2C
Carbon starvation protein CstA {ECO:0000313|EMBL:KIO44575.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L3_121_000G1_scaffold_22_30
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40572..41795)
DNA (1224bp) protein (408aa)
Thioredoxin domain-containing protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6EZU1_9PORP
Thioredoxin domain-containing protein {ECO:0000313|EMBL:CDB06233.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
thioredoxin
Displaying items 1-30 of 304 in total

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