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L3_121_000G1_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 242 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_23_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(129..914)
DNA (786bp) protein (262aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Glutamate racemase n=4 Tax=Erysipelotrichaceae RepID=B0N2Q9_9FIRM
glutamate racemase
L3_121_000G1_scaffold_23_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(917..2092)
DNA (1176bp) protein (392aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Erysipelotrichaceae RepID=B0N2Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33639.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
peptidase M15
L3_121_000G1_scaffold_23_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2137..2340)
DNA (204bp) protein (68aa)
Spore germination protein GerE n=5 Tax=Erysipelotrichaceae RepID=B0N2Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91904.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
gerE; DNA-binding HTH domain-containing protein
L3_121_000G1_scaffold_23_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2377..4149)
DNA (1773bp) protein (591aa)
UvrABC system protein C n=4 Tax=Erysipelotrichaceae RepID=B0N2Q6_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
excinuclease ABC subunit C
L3_121_000G1_scaffold_23_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4149..6461)
DNA (2313bp) protein (771aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Endonuclease MutS2 n=2 Tax=Coprobacillus RepID=G9R159_9FIRM
mutS2; MutS2 protein
L3_121_000G1_scaffold_23_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6463..7284)
DNA (822bp) protein (274aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RKA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91901.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_121_000G1_scaffold_23_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7392..8180
DNA (789bp) protein (263aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ribonuclease HIII (EC:3.1.26.4)
Ribonuclease n=5 Tax=Erysipelotrichaceae RepID=C3RK99_9FIRM
L3_121_000G1_scaffold_23_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8255..8719)
DNA (465bp) protein (155aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=4 Tax=Erysipelotrichaceae RepID=B0N2Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91899.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_121_000G1_scaffold_23_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8712..9632)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Pseudouridine synthase n=4 Tax=Erysipelotrichaceae RepID=B0N2Q1_9FIRM
pseudouridylate synthase
L3_121_000G1_scaffold_23_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9619..10104)
DNA (486bp) protein (162aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Lipoprotein signal peptidase n=4 Tax=Erysipelotrichaceae RepID=B0N2Q0_9FIRM
lspA; lipoprotein signal peptidase
L3_121_000G1_scaffold_23_11
unknown

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comp(10264..10395)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_121_000G1_scaffold_23_12
unknown

Not on your lists

comp(10419..10535)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_121_000G1_scaffold_23_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10536..10904)
DNA (369bp) protein (123aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RK95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91896.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
lactoylglutathione lyase (LGUL) family protein
L3_121_000G1_scaffold_23_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11044..11700)
DNA (657bp) protein (219aa)
Channel protein, hemolysin III family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N2P8_9FIRM
Channel protein, hemolysin III family {ECO:0000313|EMBL:EDS19341.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hemolysin-like membrane protein
L3_121_000G1_scaffold_23_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11826..12374
DNA (549bp) protein (183aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32165.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_121_000G1_scaffold_23_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12447..13337
DNA (891bp) protein (297aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=4 Tax=Erysipelotrichaceae RepID=B0N2P6_9FIRM
L3_121_000G1_scaffold_23_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13330..13962
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RK91_9FIRM
Vitamin B12 dependent methionine synthase {ECO:0000313|EMBL:CCZ32163.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Vitamin B12 dependent methionine synthase, activation domain.
L3_121_000G1_scaffold_23_18
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13944..16298
DNA (2355bp) protein (785aa)
B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. (EC:2.1.1.13)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AJ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48159.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_121_000G1_scaffold_23_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16305..18914)
DNA (2610bp) protein (870aa)
yloB1; calcium-translocating P-type ATPase YloB (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=4 Tax=Erysipelotrichaceae RepID=C3RK89_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EHM91890.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_121_000G1_scaffold_23_20
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19163..19444)
DNA (282bp) protein (94aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N2P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19335.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_121_000G1_scaffold_23_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19444..19878)
DNA (435bp) protein (145aa)
Acetyltransferase, GNAT family n=5 Tax=Erysipelotrichaceae RepID=B0N2P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48156.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
N-acetyltransferase GCN5
L3_121_000G1_scaffold_23_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19878..20831)
DNA (954bp) protein (318aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RK86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32158.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
aldo/keto reductase
L3_121_000G1_scaffold_23_23
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20860..22236)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=4 Tax=Erysipelotrichaceae RepID=B0N2N9_9FIRM
L3_121_000G1_scaffold_23_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22368..24965)
DNA (2598bp) protein (866aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=4 Tax=Erysipelotrichaceae RepID=G9R142_9FIRM
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EDS19331.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_121_000G1_scaffold_23_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25152..26105)
DNA (954bp) protein (318aa)
dagK; diacylglycerol kinase DagK (EC:2.7.1.107)
Diacylglycerol kinase catalytic domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N2N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91884.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_121_000G1_scaffold_23_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26124..26621
DNA (498bp) protein (166aa)
Peptidase propeptide and YPEB domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N2N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91883.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_121_000G1_scaffold_23_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26627..31924)
DNA (5298bp) protein (1766aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=3 Tax=Coprobacillus RepID=G9R139_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHM91882.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L3_121_000G1_scaffold_23_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32046..32606
DNA (561bp) protein (187aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R138_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32152.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_121_000G1_scaffold_23_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32881..33354
DNA (474bp) protein (158aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2N3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91817.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Predicted flavin-nucleotide-binding protein
L3_121_000G1_scaffold_23_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33376..33468)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RIB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32732.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Displaying items 1-30 of 242 in total

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