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L3_121_000G1_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_92_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(141..857)
DNA (717bp) protein (239aa)
Sporulation protein YunB (Fragment) n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAI5_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:EDS11165.1}; Flags: Fragment;; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Sporulation protein YunB (Spo_YunB).
L3_121_000G1_scaffold_92_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(985..2139)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10104.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
conserved hypothetical protein
L3_121_000G1_scaffold_92_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2292..2990)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10105.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_121_000G1_scaffold_92_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3203..4810)
DNA (1608bp) protein (536aa)
FAD dependent oxidoreductase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDR8_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDS10107.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative protein Cbei_0202
L3_121_000G1_scaffold_92_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4864..6177)
DNA (1314bp) protein (438aa)
YbbR-like protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDR9_9FIRM
YbbR-like protein {ECO:0000313|EMBL:EDS10108.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_92_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6167..7060)
DNA (894bp) protein (298aa)
TIGR00159 family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS0_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:EDS10110.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_92_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7385..8530)
DNA (1146bp) protein (382aa)
Cysteine desulfurase family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS2_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:EDS10111.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
class V aminotransferase
L3_121_000G1_scaffold_92_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8527..8760)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10112.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_92_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8843..9325)
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS4_9FIRM
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_121_000G1_scaffold_92_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9322..10074)
DNA (753bp) protein (251aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS5_9FIRM
hypothetical protein
L3_121_000G1_scaffold_92_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10383..11372)
DNA (990bp) protein (330aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS6_9FIRM
L3_121_000G1_scaffold_92_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11554..15051)
DNA (3498bp) protein (1166aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS7_9FIRM
L3_121_000G1_scaffold_92_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15085..15405)
DNA (321bp) protein (107aa)
UPF0145 protein ANACOL_02713 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS8_9FIRM
UPF0145 protein ANACOL_02713 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_92_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15410..16336)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDS9_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|SAAS:SAAS00015186}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_92_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16344..17210)
DNA (867bp) protein (289aa)
UPF0042 nucleotide-binding protein ANACOL_02715 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT0_9FIRM
Nucleotide-binding protein ANACOL_02715 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
UPF0042 nucleotide-binding protein
L3_121_000G1_scaffold_92_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17238..18149)
DNA (912bp) protein (304aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.3.1.98)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT1_9FIRM
L3_121_000G1_scaffold_92_17
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18164..19120)
DNA (957bp) protein (319aa)
ROK family protein (putative glucokinase) (EC:2.7.1.2)
ROK family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT2_9FIRM
ROK family protein {ECO:0000313|EMBL:EDS10121.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_121_000G1_scaffold_92_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19137..19862)
DNA (726bp) protein (242aa)
PHP domain protein {ECO:0000313|EMBL:EDS10122.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDS10122.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
PHP domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT3_9FIRM
putative hydrolase
L3_121_000G1_scaffold_92_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19884..20861)
DNA (978bp) protein (326aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hprK; HPr kinase/phosphorylase (EC:2.7.11.-)
HPr kinase/phosphorylase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT4_9FIRM
L3_121_000G1_scaffold_92_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21042..22235
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10124.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative secreted protein
L3_121_000G1_scaffold_92_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22450..22983
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10126.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_92_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22962..24311
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10127.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_92_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24410..24640
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10128.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_121_000G1_scaffold_92_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24809..25999
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10130.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_121_000G1_scaffold_92_25
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26155..26637)
DNA (483bp) protein (161aa)
Transcriptional repressor NrdR n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LKK4_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ATP-cone domain-containing protein
L3_121_000G1_scaffold_92_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26740..27579)
DNA (840bp) protein (280aa)
AP endonuclease, family 2 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDU4_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EDS10133.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Sugar phosphate isomerases/epimerases
L3_121_000G1_scaffold_92_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27655..28584)
DNA (930bp) protein (310aa)
Protein-export membrane protein SecF n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDU5_9FIRM
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
protein-export membrane protein SecF
L3_121_000G1_scaffold_92_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28584..29945)
DNA (1362bp) protein (454aa)
Protein translocase subunit SecD n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDU6_9FIRM
Export membrane protein SecD {ECO:0000313|EMBL:EDS10135.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
secD; Protein-export membrane protein SecD
L3_121_000G1_scaffold_92_29
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30184..31617)
DNA (1434bp) protein (478aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Adenylosuccinate lyase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDU8_9FIRM
adenylosuccinate lyase
L3_121_000G1_scaffold_92_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31736..33022)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10138.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative aminotransferase MSMEG_6286/MSMEI_6121
Displaying items 1-30 of 135 in total

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