ggKbase home page

L3_121_000G1_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_155_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

578..2260
DNA (1683bp) protein (561aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
2-isopropylmalate synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICU7_9FIRM
2-isopropylmalate synthase
L3_121_000G1_scaffold_155_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2538..3020
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47019.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_121_000G1_scaffold_155_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3118..3690)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47018.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4086..4292
DNA (207bp) protein (69aa)
Heavy metal transport/detoxification protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9R6_9FIRM
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:CDB47017.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
heavy metal transport/detoxification protein, chaperone
L3_121_000G1_scaffold_155_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4298..6526
DNA (2229bp) protein (743aa)
Copper-translocating P-type ATPase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INS9_9FIRM
Copper-translocating P-type ATPase {ECO:0000313|EMBL:CDB47016.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
copper-translocating P-type ATPase
L3_121_000G1_scaffold_155_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6827..7066
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47015.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_121_000G1_scaffold_155_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7126..7281
DNA (156bp) protein (52aa)
Helix-turn-helix n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKU0_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDB47014.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_121_000G1_scaffold_155_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7300..7743
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47013.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7775..8413
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47012.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8439..8705
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47011.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8690..9991
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47010.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
patatin
L3_121_000G1_scaffold_155_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10004..11002
DNA (999bp) protein (333aa)
Beta-lactamase domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKT8_9FIRM
Beta-lactamase domain protein {ECO:0000313|EMBL:CDB47009.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
beta-lactamase domain protein
L3_121_000G1_scaffold_155_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11019..11543
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47008.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11591..12646)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9Q7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47007.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12749..12949)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB47006.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_16
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13139..14647
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VPG5_9FIRM
DNA methyltransferase {ECO:0000313|EMBL:EWM55082.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
type I restriction-modification system, M subunit
L3_121_000G1_scaffold_155_17
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14634..15686
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SZT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52136.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L3_121_000G1_scaffold_155_18
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15679..16200
DNA (522bp) protein (174aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KRN4_9FIRM
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EFG24480.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
type I restriction modification DNA specificity domain-containing protein
L3_121_000G1_scaffold_155_19
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16197..16805)
DNA (609bp) protein (203aa)
Putative type I restriction enzyme n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S354_FINM2
putative type I restriction enzyme
Putative type I restriction enzyme {ECO:0000313|EMBL:BAG08794.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus).;"
L3_121_000G1_scaffold_155_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16882..17865
DNA (984bp) protein (328aa)
integrase n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B5D7C7
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK95472.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_121_000G1_scaffold_155_21
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17879..19000
DNA (1122bp) protein (374aa)
tRNA ligase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B33E1F
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:CDD33437.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
putative type I restriction enzyme S protein
L3_121_000G1_scaffold_155_22
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

19136..19516
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QDQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC28961.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L3_121_000G1_scaffold_155_23
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19536..22670
DNA (3135bp) protein (1045aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BT20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62291.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
type I restriction-modification system restriction subunit
L3_121_000G1_scaffold_155_24
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22722..23240)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DCX9_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EKN66164.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
L3_121_000G1_scaffold_155_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23928..24335)
DNA (408bp) protein (136aa)
Uncharacterized conserved protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9Y2_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDB47003.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24555..25502)
DNA (948bp) protein (316aa)
Putative membrane protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9Q3_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB47002.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25570..25821)
DNA (252bp) protein (84aa)
Putative membrane protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INR7_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB47001.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_121_000G1_scaffold_155_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26020..26520)
DNA (501bp) protein (167aa)
Putative membrane protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INR7_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB47001.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
EamA-like transporter family.
L3_121_000G1_scaffold_155_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26541..27233)
DNA (693bp) protein (231aa)
Ser/Thr phosphatase family protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICS3_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDB47000.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
metallophosphoesterase
L3_121_000G1_scaffold_155_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27496..28677
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I9X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB46998.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
sugar (and other) transporter family protein
Displaying items 1-30 of 117 in total

View Taxonomy