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L3_121_000G1_scaffold_157

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_157_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..592)
DNA (591bp) protein (197aa)
Tetratricopeptide repeat protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHS1_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDP20655.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Suppressor of fused protein (SUFU).
L3_121_000G1_scaffold_157_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(594..803)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9K5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44529.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_121_000G1_scaffold_157_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(826..1311)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9K4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44528.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
L3_121_000G1_scaffold_157_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1403..2362)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QN37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64315.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_121_000G1_scaffold_157_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2374..5592)
DNA (3219bp) protein (1073aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R624_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64316.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_121_000G1_scaffold_157_6
unknown

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comp(5821..5913)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_121_000G1_scaffold_157_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5932..7368)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46905.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_121_000G1_scaffold_157_8
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7541..8182)
DNA (642bp) protein (214aa)
Transcription regulation protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BGU1_9CLOT
Transcription regulation protein {ECO:0000313|EMBL:CDA62405.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
Transcriptional regulator
L3_121_000G1_scaffold_157_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8402..9772)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45624.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative efflux protein, MATE family
L3_121_000G1_scaffold_157_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10021..11241)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46633.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase U32 family protein
L3_121_000G1_scaffold_157_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11302..12456)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46632.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_121_000G1_scaffold_157_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(12815..13405)
DNA (591bp) protein (197aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YA89_9FIRM
putative 5-formyltetrahydrofolate cyclo-ligase family protein
L3_121_000G1_scaffold_157_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13371..13916)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46629.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DJ-1 family protein
L3_121_000G1_scaffold_157_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13986..14654)
DNA (669bp) protein (223aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Thymidylate kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCT2_9FIRM
hypothetical protein
L3_121_000G1_scaffold_157_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14654..15394)
DNA (741bp) protein (247aa)
UDP-N-acetylmannosamine--N-acetylglucosaminyldiphosphoundecaprenol N-acetylmannosaminyltransferase (EC:2.4.1.187)
N-acetylglucosaminyldiphosphoundecaprenol n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCT1_9FIRM
N-acetylglucosaminyldiphosphoundecaprenol {ECO:0000313|EMBL:EGJ46627.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_121_000G1_scaffold_157_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15797..17311
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27292.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
carbon starvation protein CstA
L3_121_000G1_scaffold_157_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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17443..18153
DNA (711bp) protein (237aa)
Integral membrane protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDH1_9FIRM
Integral membrane protein {ECO:0000313|EMBL:EGJ46867.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Hypothetical protein, predicted transmembrane protein
L3_121_000G1_scaffold_157_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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18379..18924
DNA (546bp) protein (182aa)
50S ribosomal protein L10 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAP2_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rplJ; 50S ribosomal protein L10
L3_121_000G1_scaffold_157_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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18978..19352
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAP1_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rplL; 50S ribosomal protein L7/L12
L3_121_000G1_scaffold_157_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19415..20956)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46879.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
stage V sporulation protein B
L3_121_000G1_scaffold_157_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21106..21882
DNA (777bp) protein (259aa)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDI2_9FIRM
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EGJ46878.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
3-hydroxybutyryl-CoA dehydratase
L3_121_000G1_scaffold_157_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22643..23584)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46877.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_121_000G1_scaffold_157_23
unknown

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comp(23958..24212)
DNA (255bp) protein (85aa)

This feature has no annotations

L3_121_000G1_scaffold_157_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24209..25516)
DNA (1308bp) protein (436aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA69_9FIRM
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EGJ47247.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_121_000G1_scaffold_157_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25529..26980)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47248.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ATPase AAA
L3_121_000G1_scaffold_157_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27260..28171
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47249.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Ig-like domain-containing surface protein
L3_121_000G1_scaffold_157_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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28655..29494
DNA (840bp) protein (280aa)
hbd; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XET6_9FIRM
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EGJ45956.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_121_000G1_scaffold_157_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29516..30661
DNA (1146bp) protein (382aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase, short-chain specific n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XET7_9FIRM
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:EGJ45957.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_121_000G1_scaffold_157_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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30680..31480
DNA (801bp) protein (267aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XET8_9FIRM
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:EGJ45958.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
etfB; electron transfer flavoprotein beta subunit
L3_121_000G1_scaffold_157_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31502..32614
DNA (1113bp) protein (371aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XET9_9FIRM
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:EGJ45959.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
etfA; electron transfer flavoprotein alpha subunit
Displaying items 1-30 of 106 in total

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