ggKbase home page

L3_121_000G1_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_168_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..486
DNA (486bp) protein (162aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=2 Tax=Bifidobacterium RepID=A7A4D6_BIFAD
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AJE05434.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

513..782
DNA (270bp) protein (90aa)
Putative secreted protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0H7_BIFAA
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AJE05434.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

791..2224
DNA (1434bp) protein (478aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Putative esterase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GR21_9BIFI
putative esterase
L3_121_000G1_scaffold_168_4
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2287..2916
DNA (630bp) protein (210aa)
Maltose O-acetyltransferase n=2 Tax=Bifidobacterium RepID=A1A0H9_BIFAA
maltose O-acetyltransferase
Maltose O-acetyltransferase {ECO:0000313|EMBL:CCY19866.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_121_000G1_scaffold_168_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3119..4639)
DNA (1521bp) protein (507aa)
Xylulose kinase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H4J2_9BIFI
Xylulose kinase {ECO:0000313|EMBL:KIM01726.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
xylB; xylulose kinase
L3_121_000G1_scaffold_168_6
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4809..6041
DNA (1233bp) protein (411aa)
ROK family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4E3_BIFAD
XylR-type repressor {ECO:0000313|EMBL:KFI96609.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative XylR-type repressor
L3_121_000G1_scaffold_168_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6063..6710)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4E4_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05439.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_8
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6894..7265
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4E5_BIFAD
binding-protein-dependent transport systems inner membrane component
ABC transporter, permease protein {ECO:0000313|EMBL:KFI96611.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_121_000G1_scaffold_168_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7456..9084
DNA (1629bp) protein (543aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4E7_BIFAD
hypothetical protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIM01727.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9354..10781
DNA (1428bp) protein (476aa)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H4J7_9BIFI
Beta-glucosidase
Beta-glucosidase {ECO:0000313|EMBL:AJE05442.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10912..12300
DNA (1389bp) protein (463aa)
Beta-galactosidase trimerization domain protein n=2 Tax=Bifidobacterium RepID=A7A4F1_BIFAD
beta-galactosidase
Beta-galactosidase trimerization domain protein {ECO:0000313|EMBL:EDN83783.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_121_000G1_scaffold_168_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12469..15237)
DNA (2769bp) protein (923aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4F2_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KIM01728.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_121_000G1_scaffold_168_13
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15488..16483
DNA (996bp) protein (332aa)
Transcriptional regulator {ECO:0000313|EMBL:KFI96615.1}; EC=2.7.1.85 {ECO:0000313|EMBL:KFI96615.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ROK family protein n=2 Tax=Bifidobacterium RepID=R5GR39_9BIFI
transcriptional regulator
L3_121_000G1_scaffold_168_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16621..17424)
DNA (804bp) protein (268aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium RepID=A7A4F5_BIFAD
putative TetR-type transcriptional regulator
Putative TetR-type transcriptional regulator {ECO:0000313|EMBL:AJE05447.1}; TetR-type transcriptional regulator {ECO:0000313|EMBL:AII75876.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_15
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17496..18314)
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A4F6_BIFAD
putative xylan esterase
Uncharacterized protein {ECO:0000313|EMBL:CCY19882.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_121_000G1_scaffold_168_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18532..21033)
DNA (2502bp) protein (834aa)
Carbohydrate binding domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRM7_9BIFI
cellobiose-phosphorylase
Cellobiose-phosphorylase {ECO:0000313|EMBL:AII75878.1}; Glycosyl transferase {ECO:0000313|EMBL:KIM02060.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_17
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21487..21666
DNA (180bp) protein (60aa)
50S ribosomal protein L31 n=3 Tax=Bifidobacterium RepID=RL31_BIFAA
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
L3_121_000G1_scaffold_168_18
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21720..22808
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=3 Tax=Bifidobacterium RepID=RF1_BIFAA
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_121_000G1_scaffold_168_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22818..23738
DNA (921bp) protein (307aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Release factor glutamine methyltransferase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GR56_9BIFI
methylase protein
L3_121_000G1_scaffold_168_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23984..25180
DNA (1197bp) protein (399aa)
Solute binding protein of ABC transporter for branched-chain amino acids n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0J1_BIFAA
solute binding protein of ABC transporter for branched-chain amino acids
Solute binding protein of ABC transporter for branched-chain amino acids {ECO:0000313|EMBL:AII75882.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25355..26281
DNA (927bp) protein (309aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=A7A4G4_BIFAD
permease of ABC transporter for branched-chain amino acids
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDN83797.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_121_000G1_scaffold_168_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26286..27407
DNA (1122bp) protein (374aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4G5_BIFAD
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDN83798.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
permease of ABC transporter for branched-chain amino acids
L3_121_000G1_scaffold_168_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27404..28216
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4G6_BIFAD
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIM02053.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
ATP binding protein of ABC transporter for branched-chain amino acids
L3_121_000G1_scaffold_168_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28216..28920
DNA (705bp) protein (235aa)
ATP binding protein of ABC transporter for branched-chain amino acids n=3 Tax=Bifidobacterium RepID=A1A0J5_BIFAA
ATP binding protein of ABC transporter for branched-chain amino acids
ATP binding protein of ABC transporter for branched-chain amino acids {ECO:0000313|EMBL:AJE05458.1}; Amino acid ABC transporter ATPase {ECO:0000313|EMBL:KIM02052.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29078..29740
DNA (663bp) protein (221aa)
Conserved protein in the Sua5/YciO/YrdC family n=2 Tax=Bifidobacterium adolescentis RepID=A1A0J6_BIFAA
Sua5/YciO/YrdC family protein
Sua5/YciO/YrdC family protein {ECO:0000313|EMBL:AII75887.1}; Translation factor Sua5 {ECO:0000313|EMBL:KIM02051.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_26
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29737..30915
DNA (1179bp) protein (393aa)
Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase {ECO:0000313|EMBL:KFI96628.1}; EC=2.7.8.35 {ECO:0000313|EMBL:KFI96628.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Possible undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0J7_BIFAA
rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase
L3_121_000G1_scaffold_168_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31085..32611
DNA (1527bp) protein (509aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Bifidobacterium RepID=A1A0J8_BIFAA
Inosine-5'-monophosphate dehydrogenase
L3_121_000G1_scaffold_168_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32775..33809)
DNA (1035bp) protein (345aa)
Probable LacI-type transcriptional regulator n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H191_9BIFI
LacI-type transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:AII75890.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34141..35898
DNA (1758bp) protein (586aa)
Alpha-glucosidase n=2 Tax=Bifidobacterium adolescentis RepID=Q93CA0_BIFAD
aglA; alpha-1,4-glucosidase
Alpha-glucosidase {ECO:0000313|EMBL:AAL05573.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_121_000G1_scaffold_168_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36137..36790
DNA (654bp) protein (218aa)
Oligoribonuclease n=3 Tax=root RepID=A1A0K1_BIFAA
oligoribonuclease
Oligoribonuclease {ECO:0000313|EMBL:AII75892.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 118 in total

View Taxonomy