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L3_121_000G1_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_233_1
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

159..1418
DNA (1260bp) protein (420aa)
Glycosyl hydrolase family 109 protein 2 n=2 Tax=Bacteroides RepID=G1092_BACTN
oxidoreductase
Glycosyl hydrolase family 109 protein 2 {ECO:0000313|EMBL:EES68433.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_121_000G1_scaffold_233_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1458..3305
DNA (1848bp) protein (616aa)
Alpha-1,3-galactosidase B n=3 Tax=Bacteroides RepID=GLAB_BACTN
Alpha-1,3-galactosidase B {ECO:0000313|EMBL:EOS00674.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L3_121_000G1_scaffold_233_3
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3370..3915)
DNA (546bp) protein (182aa)
RNA polymerase ECF-type sigma factor n=4 Tax=Bacteroides RepID=Q89ZX1_BACTN
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDE81953.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L3_121_000G1_scaffold_233_4
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4260..5198
DNA (939bp) protein (313aa)
Anti-sigma factor n=2 Tax=Bacteroides RepID=R7KZY3_9BACE
Anti-sigma factor {ECO:0000313|EMBL:CDE81955.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
anti-sigma factor
L3_121_000G1_scaffold_233_5
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5249..8602
DNA (3354bp) protein (1118aa)
SusC homolog n=2 Tax=Bacteroides RepID=Q89ZX4_BACTN
SusC homolog {ECO:0000313|EMBL:AAO79352.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
hypothetical protein
L3_121_000G1_scaffold_233_6
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8609..10549
DNA (1941bp) protein (647aa)
Outer membrane protein n=2 Tax=Bacteroides RepID=R7L426_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68438.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_121_000G1_scaffold_233_7
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10586..11878
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6ILB3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68439.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L3_121_000G1_scaffold_233_8
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11961..14534
DNA (2574bp) protein (858aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZX7_BACTN
Uncharacterized protein {ECO:0000313|EMBL:AAO79349.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
hypothetical protein
L3_121_000G1_scaffold_233_9
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14768..16171
DNA (1404bp) protein (468aa)
Glycosyl hydrolase family 109 protein 1 n=5 Tax=Bacteroides RepID=G1091_BACTN
oxidoreductase
Glycosyl hydrolase family 109 protein 1 {ECO:0000313|EMBL:EES68441.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_121_000G1_scaffold_233_10
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16244..17170
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6ILB6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES68442.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
transporter
L3_121_000G1_scaffold_233_11
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17194..20568
DNA (3375bp) protein (1125aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7L429_9BACE
beta-galactosidase
L3_121_000G1_scaffold_233_12
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20598..21689
DNA (1092bp) protein (364aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZY1_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES68444.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_121_000G1_scaffold_233_13
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21735..22385)
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZY2_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO79344.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_000G1_scaffold_233_14
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22396..23295)
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R9H9J6_BACT4
Putative permease {ECO:0000313|EMBL:CDE81965.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
permease
L3_121_000G1_scaffold_233_15
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23360..24169)
DNA (810bp) protein (270aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
tRNA pseudouridine synthase A n=4 Tax=Bacteroides RepID=TRUA_BACTN
L3_121_000G1_scaffold_233_16
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24217..28374)
DNA (4158bp) protein (1386aa)
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) n=1 Tax=Bacteroides sp. 1_1_14 RepID=D7I8G4_9BACE
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) {ECO:0000313|EMBL:EFI06375.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
two-component system sensor histidine kinase/response regulator
L3_121_000G1_scaffold_233_17
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28679..29314)
DNA (636bp) protein (212aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6ILC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE81968.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
L3_121_000G1_scaffold_233_18
unknown

Not on your lists

29592..29756
DNA (165bp) protein (55aa)

This feature has no annotations

L3_121_000G1_scaffold_233_19
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29813..30382
DNA (570bp) protein (190aa)
FimX-like protein n=5 Tax=Bacteroides RepID=Q89ZY7_BACTN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06373.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_121_000G1_scaffold_233_20
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30395..31849
DNA (1455bp) protein (485aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R7KZZ8_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06372.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
L3_121_000G1_scaffold_233_21
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31923..32108)
DNA (186bp) protein (62aa)
Lambda repressor-like, DNA-binding protein n=5 Tax=Bacteroides RepID=Q89ZY9_BACTN
hypothetical protein
Lambda repressor-like, DNA-binding protein {ECO:0000313|EMBL:AAO79337.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_000G1_scaffold_233_22
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32092..32241)
DNA (150bp) protein (50aa)
Toxin-antitoxin system, toxin component, RelE family n=4 Tax=Bacteroides RepID=D7I8F9_9BACE
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EFI06370.1}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
toxin RelE
L3_121_000G1_scaffold_233_23
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32375..33013)
DNA (639bp) protein (213aa)
Histone-like bacterial DNA-binding protein n=5 Tax=Bacteroides RepID=Q89ZZ0_BACTN
hypothetical protein
Histone-like bacterial DNA-binding protein {ECO:0000313|EMBL:AAO79336.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_000G1_scaffold_233_24
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33343..34602
DNA (1260bp) protein (420aa)
Putative helicase n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q89ZZ1_BACTN
hypothetical protein
Putative helicase {ECO:0000313|EMBL:AAO79335.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_000G1_scaffold_233_25
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34646..36127)
DNA (1482bp) protein (494aa)
Putative transcriptional regulator n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q89ZZ2_BACTN
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:AAO79334.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_000G1_scaffold_233_26
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36896..37060)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=I0Q057_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIC73110.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_121_000G1_scaffold_233_27
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37270..38550
DNA (1281bp) protein (427aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZZ4_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO79332.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_000G1_scaffold_233_28
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38669..39751
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZZ5_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO79331.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_000G1_scaffold_233_29
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39765..40808
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZZ6_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO79330.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_121_000G1_scaffold_233_30
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40827..43703
DNA (2877bp) protein (959aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q89ZZ7_BACTN
Uncharacterized protein {ECO:0000313|EMBL:AAO79329.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
hypothetical protein
Displaying items 1-30 of 119 in total

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