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L3_121_000G1_scaffold_466

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_466_1
unknown

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6C2D3_9PORP
L3_121_000G1_scaffold_466_2
unknown

Not on your lists

183..368
DNA (186bp) protein (62aa)

This feature has no annotations

L3_121_000G1_scaffold_466_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

439..1131
DNA (693bp) protein (231aa)
Hemerythrin HHE cation binding domain protein n=3 Tax=Parabacteroides RepID=A7AIL8_9PORP
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:EDN85235.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_466_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1131..1739
DNA (609bp) protein (203aa)
Transcriptional regulator, LuxR family n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AIL9_9PORP
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDN85236.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_121_000G1_scaffold_466_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1743..4610
DNA (2868bp) protein (956aa)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y683_9PORP
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:CDD13932.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase 3
L3_121_000G1_scaffold_466_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4670..5308)
DNA (639bp) protein (213aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIM1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85238.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_466_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5311..5970)
DNA (660bp) protein (220aa)
Translocator protein, LysE family n=3 Tax=Parabacteroides RepID=A7AIM2_9PORP
Translocator protein, LysE family {ECO:0000313|EMBL:EDN85239.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_466_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6118..7659)
DNA (1542bp) protein (514aa)
Cerebroside-sulfatase (EC:3.1.6.1)
Arylsulfatase n=2 Tax=Parabacteroides RepID=A7AIM4_9PORP
Arylsulfatase {ECO:0000313|EMBL:CDD13935.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_000G1_scaffold_466_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7680..7970
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZKH3_9PORP
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:EKN11565.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_121_000G1_scaffold_466_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8328..8552)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGW4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85581.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_000G1_scaffold_466_11
unknown

Not on your lists

8578..9027
DNA (450bp) protein (150aa)

This feature has no annotations

L3_121_000G1_scaffold_466_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9325..13017
DNA (3693bp) protein (1231aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=2 Tax=Parabacteroides merdae RepID=K6BFM8_9PORP
L3_121_000G1_scaffold_466_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13109..13711
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AIN3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85250.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_466_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13898..15799
DNA (1902bp) protein (634aa)
Glycosyl hydrolase family 20, catalytic domain protein n=2 Tax=Parabacteroides merdae RepID=A7AIN5_9PORP
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EDN85252.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
beta-N-acetylhexosaminidase
L3_121_000G1_scaffold_466_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15884..17179
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X652_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14614.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_466_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17261..18079
DNA (819bp) protein (273aa)
Phosphate binding protein n=3 Tax=Parabacteroides merdae RepID=A7AIN7_9PORP
Phosphate binding protein {ECO:0000313|EMBL:EDN85254.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphate ABC transporter substrate-binding protein
L3_121_000G1_scaffold_466_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18081..18209)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BFN5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85255.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_000G1_scaffold_466_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18308..19396
DNA (1089bp) protein (363aa)
Oxidoreductase 2-nitropropane dioxygenase family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBC5_9PORP
Oxidoreductase 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:CDD13646.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_466_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19523..19936)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AIP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13647.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_466_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20087..20644
DNA (558bp) protein (186aa)
RNA polymerase sigma factor n=4 Tax=Parabacteroides RepID=A7AIP1_9PORP
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase ECF-type sigma factor
L3_121_000G1_scaffold_466_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20646..21005
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIP2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85259.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_466_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


21158..22951
DNA (1794bp) protein (598aa)
30S ribosomal protein S1 n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BFP0_9PORP
Putative ribosomal protein S1 {ECO:0000313|EMBL:EDN85260.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rpsA; 30S ribosomal protein S1
L3_121_000G1_scaffold_466_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23039..23302)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85261.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_466_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23566..23979
DNA (414bp) protein (138aa)
Response regulator receiver domain protein n=2 Tax=Parabacteroides RepID=R6XZH9_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:CDD11617.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system response regulator
L3_121_000G1_scaffold_466_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24283..24558
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B344_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:CDD11610.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
histone-like protein
L3_121_000G1_scaffold_466_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24729..25793)
DNA (1065bp) protein (355aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
3-dehydroquinate synthase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WKD6_9PORP
3-dehydroquinate synthase
L3_121_000G1_scaffold_466_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(25963..28590)
DNA (2628bp) protein (876aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=2 Tax=Parabacteroides merdae RepID=A7AIQ1_9PORP
L3_121_000G1_scaffold_466_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28688..29671
DNA (984bp) protein (328aa)
Peptidase, M23 family n=3 Tax=Parabacteroides RepID=A7AIQ2_9PORP
Peptidase, M23 family {ECO:0000313|EMBL:EDN85269.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
peptidase
L3_121_000G1_scaffold_466_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29687..30043
DNA (357bp) protein (119aa)
Transcriptional regulator, MerR family n=6 Tax=Parabacteroides RepID=A7AIQ3_9PORP
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDN85270.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_121_000G1_scaffold_466_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30131..30526
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AIQ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13875.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
Displaying items 1-30 of 117 in total

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