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L3_121_000G1_scaffold_539

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_539_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(114..662)
DNA (549bp) protein (183aa)
30S ribosomal protein S16 n=2 Tax=Parabacteroides merdae RepID=A7AFV5_9PORP
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rpsP; 30S ribosomal protein S16
L3_121_000G1_scaffold_539_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

812..1753
DNA (942bp) protein (314aa)
Glycosyl hydrolase, family 43 n=2 Tax=Parabacteroides merdae RepID=A7AFV6_9PORP
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EDN86012.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
1,4-beta-xylanase
L3_121_000G1_scaffold_539_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1927..3564
DNA (1638bp) protein (546aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides merdae RepID=A7AFW0_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN86016.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ABC transporter ATP-binding protein
L3_121_000G1_scaffold_539_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3561..5039)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFW1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11365.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_539_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5196..5807
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFW2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86018.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transmembrane protein
L3_121_000G1_scaffold_539_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5826..6896
DNA (1071bp) protein (357aa)
L-asparaginase type I n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYQ7_9PORP
L-asparaginase type I {ECO:0000313|EMBL:CDD11362.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L-asparaginase I
L3_121_000G1_scaffold_539_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6927..7730
DNA (804bp) protein (268aa)
Metallo-beta-lactamase domain protein n=3 Tax=Parabacteroides RepID=A7AFW4_9PORP
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDD11361.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
metallo-beta-lactamase superfamily hydrolase
L3_121_000G1_scaffold_539_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8745..9950
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6C0U6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86023.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_539_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9971..10204
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11359.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_000G1_scaffold_539_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10315..11535
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AIX5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15683.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_121_000G1_scaffold_539_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11532..11663
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFW9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11356.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_000G1_scaffold_539_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11759..12433
DNA (675bp) protein (225aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Signal peptidase I n=2 Tax=Parabacteroides merdae RepID=A7AFX0_9PORP
lepB_5; signal peptidase I
L3_121_000G1_scaffold_539_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12975..13406)
DNA (432bp) protein (144aa)
Ribose-5-phosphate isomerase B n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWN7_9PORP
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CDD11354.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ribose 5-phosphate isomerase B
L3_121_000G1_scaffold_539_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13509..15536)
DNA (2028bp) protein (676aa)
Transketolase thiamine diphosphate binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJN9_9PORP
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDD11353.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transketolase
L3_121_000G1_scaffold_539_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15872..16564)
DNA (693bp) protein (231aa)
Hydrolase, NUDIX family n=4 Tax=Parabacteroides RepID=A7AFX3_9PORP
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDN86029.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_539_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16593..17738)
DNA (1146bp) protein (382aa)
Galactokinase n=3 Tax=Parabacteroides RepID=A7AFX4_9PORP
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
galactokinase
L3_121_000G1_scaffold_539_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17829..19085)
DNA (1257bp) protein (419aa)
Transporter, major facilitator family protein n=3 Tax=Parabacteroides RepID=A7AFX5_9PORP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN86031.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
major facilitator superfamily MFS_1
L3_121_000G1_scaffold_539_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19125..20204)
DNA (1080bp) protein (360aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Aldose 1-epimerase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZW41_9PORP
aldose 1-epimerase
L3_121_000G1_scaffold_539_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20394..22349
DNA (1956bp) protein (652aa)
Carbohydrate binding domain protein n=2 Tax=Parabacteroides merdae RepID=A7AFX7_9PORP
Carbohydrate binding domain protein {ECO:0000313|EMBL:EDN86033.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alpha-L-arabinofuranosidase
L3_121_000G1_scaffold_539_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22593..23561)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BDF6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86035.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alpha/beta hydrolase
L3_121_000G1_scaffold_539_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23816..25363)
DNA (1548bp) protein (516aa)
Tetratricopeptide repeat protein n=2 Tax=Parabacteroides merdae RepID=A7AFY0_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN86036.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_539_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25528..26457
DNA (930bp) protein (310aa)
Ribokinase n=3 Tax=Parabacteroides RepID=A7AFY2_9PORP
Ribokinase {ECO:0000313|EMBL:EDN86038.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ribokinase
L3_121_000G1_scaffold_539_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26483..27499
DNA (1017bp) protein (339aa)
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Parabacteroides merdae RepID=A7AFY3_9PORP
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:EDN86039.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
nucleoside hydrolase
L3_121_000G1_scaffold_539_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27507..28508
DNA (1002bp) protein (334aa)
Fatty acid elongase 3-ketoacyl-CoA synthase 1 n=2 Tax=Parabacteroides merdae RepID=A7AFY4_9PORP
Fatty acid elongase 3-ketoacyl-CoA synthase 1 {ECO:0000313|EMBL:EDN86040.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
integral membrane protein
L3_121_000G1_scaffold_539_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28658..29416
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFY6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86042.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_539_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29388..29771
DNA (384bp) protein (128aa)
GtrA-like protein n=3 Tax=Parabacteroides RepID=A7AFY7_9PORP
GtrA-like protein {ECO:0000313|EMBL:EDN86043.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
GtrA family protein
L3_121_000G1_scaffold_539_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29778..30710
DNA (933bp) protein (311aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Parabacteroides RepID=A7AFY8_9PORP
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDD11327.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L3_121_000G1_scaffold_539_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30722..31123)
DNA (402bp) protein (134aa)
Pyridoxamine 5'-phosphate oxidase family protein n=4 Tax=Parabacteroides RepID=A7AFY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15701.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
general stress protein
L3_121_000G1_scaffold_539_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31198..32010)
DNA (813bp) protein (271aa)
Transcriptional regulator, AraC family n=2 Tax=Parabacteroides merdae RepID=A7AFZ0_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN86046.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_121_000G1_scaffold_539_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32023..33168)
DNA (1146bp) protein (382aa)
Glycerate kinase n=2 Tax=Parabacteroides merdae RepID=A7AFZ1_9PORP
Glycerate kinase {ECO:0000313|EMBL:EDN86047.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycerate kinase
Displaying items 1-30 of 120 in total

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