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L3_121_000G1_scaffold_619

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_619_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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123..2354
DNA (2232bp) protein (744aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Polyribonucleotide nucleotidyltransferase n=2 Tax=Parabacteroides merdae RepID=A7AB69_9PORP
polynucleotide phosphorylase
L3_121_000G1_scaffold_619_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3048..4688)
DNA (1641bp) protein (547aa)
Fumarate hydratase class I, aerobic n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A8X2_9PORP
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:EKN11105.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
fumarate hydratase
L3_121_000G1_scaffold_619_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4836..5546
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K5ZJ28_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12117.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
two-component system response regulator
L3_121_000G1_scaffold_619_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5559..6845
DNA (1287bp) protein (429aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides merdae RepID=A7AB64_9PORP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDN88040.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two-component system sensor histidine kinase
L3_121_000G1_scaffold_619_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6902..7855
DNA (954bp) protein (318aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZLE7_9PORP
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
cobalamin biosynthesis protein CbiB
L3_121_000G1_scaffold_619_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7871..8476
DNA (606bp) protein (202aa)
S4 domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQR5_9PORP
S4 domain protein {ECO:0000313|EMBL:CDD13653.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
pseudouridine synthase
L3_121_000G1_scaffold_619_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8481..8996
DNA (516bp) protein (172aa)
Adenosylcobinamide kinase/adenosylcobinamidephosphate guanylyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X3E9_9PORP
Adenosylcobinamide kinase/adenosylcobinamidephosphate guanylyltransferase {ECO:0000313|EMBL:CDD13654.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cobinamide kinase
L3_121_000G1_scaffold_619_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9012..10049
DNA (1038bp) protein (346aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWG0_9PORP
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L3_121_000G1_scaffold_619_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10078..10830
DNA (753bp) protein (251aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Cobalamin synthase n=3 Tax=Parabacteroides RepID=A7AB59_9PORP
cobalamin 5'-phosphate synthase
L3_121_000G1_scaffold_619_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10843..11376
DNA (534bp) protein (178aa)
Alpha-ribazole phosphatase n=3 Tax=Parabacteroides RepID=A7AB58_9PORP
Alpha-ribazole phosphatase {ECO:0000313|EMBL:CDD13657.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphoglycerate mutase
L3_121_000G1_scaffold_619_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11580..12422)
DNA (843bp) protein (281aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AB56_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88032.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_619_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12451..12888)
DNA (438bp) protein (146aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AB55_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13659.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_619_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13016..14674
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWG4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13660.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
lysyl endopeptidase
L3_121_000G1_scaffold_619_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14918..16609
DNA (1692bp) protein (564aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AB53_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88029.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_619_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16918..19239
DNA (2322bp) protein (774aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6ATE9_9PORP
Putative alpha-1 2-mannosidase {ECO:0000313|EMBL:CDD13662.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L3_121_000G1_scaffold_619_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19254..20906
DNA (1653bp) protein (551aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AB50_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88026.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_121_000G1_scaffold_619_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21318..22787)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BFP1_9PORP
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDN88023.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_619_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22838..25720)
DNA (2883bp) protein (961aa)
Tat pathway signal sequence domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWG7_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD13665.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Tat pathway signal sequence domain-containing protein
L3_121_000G1_scaffold_619_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25737..26489)
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AB45_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88021.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_619_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26547..28028)
DNA (1482bp) protein (494aa)
Polygalacturonase (Pectinase) n=2 Tax=Parabacteroides RepID=R6Y5H4_9PORP
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:CDD13667.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L3_121_000G1_scaffold_619_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28191..29618
DNA (1428bp) protein (476aa)
WD40-like protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQS7_9PORP
WD40-like protein {ECO:0000313|EMBL:CDD13668.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_619_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29632..31317
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X3F9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13669.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_000G1_scaffold_619_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31389..33230)
DNA (1842bp) protein (614aa)
SusD family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWH2_9PORP
SusD family protein {ECO:0000313|EMBL:CDD13670.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RagB/SusD domain-containing protein
L3_121_000G1_scaffold_619_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33244..36402)
DNA (3159bp) protein (1053aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7AB40_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN88016.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent receptor plug
L3_121_000G1_scaffold_619_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36600..37520
DNA (921bp) protein (307aa)
Transcriptional regulator AraC family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQT1_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD13673.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
AraC family transcriptional regulator
L3_121_000G1_scaffold_619_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37534..39144)
DNA (1611bp) protein (537aa)
Peptidase C69 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X3G3_9PORP
Peptidase C69 family {ECO:0000313|EMBL:CDD13674.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative secreted peptidase
L3_121_000G1_scaffold_619_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39394..41190)
DNA (1797bp) protein (599aa)
GTP-binding protein TypA n=2 Tax=Parabacteroides merdae RepID=A7AB37_9PORP
GTP-binding protein TypA {ECO:0000313|EMBL:EDN88013.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
GTP-binding protein TypA
L3_121_000G1_scaffold_619_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


41362..41631
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=7 Tax=Parabacteroides RepID=A7AB36_9PORP
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
rpsO; 30S ribosomal protein S15
L3_121_000G1_scaffold_619_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41789..42373
DNA (585bp) protein (195aa)
Cupin domain protein n=2 Tax=Parabacteroides merdae RepID=A7AB35_9PORP
Cupin domain protein {ECO:0000313|EMBL:EDN88011.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L3_121_000G1_scaffold_619_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42386..44041
DNA (1656bp) protein (552aa)
AMP-binding protein (EC:2.3.1.86)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6ATD6_9PORP
AMP-binding domain protein {ECO:0000313|EMBL:CDD13679.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Displaying items 1-30 of 133 in total

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