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L3_121_000G1_scaffold_680

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_121_000G1_scaffold_680_1
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1023)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5BSY7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ90387.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
putative integrase
L3_121_000G1_scaffold_680_2
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1613..2383
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PNQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF59585.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_121_000G1_scaffold_680_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2509..2796
DNA (288bp) protein (96aa)
DNA binding domain, excisionase family n=8 Tax=Bacteroidales RepID=A7A9K9_9PORP
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EKN31116.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
DNA binding domain, excisionase family
L3_121_000G1_scaffold_680_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2802..3875
DNA (1074bp) protein (358aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A7A9K8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88315.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_680_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4039..5004
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4W1R3_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EFR55528.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
DNA primase (bacterial type)
L3_121_000G1_scaffold_680_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5149..5532
DNA (384bp) protein (128aa)
Bacterial mobilization protein MobC n=2 Tax=Parabacteroides RepID=E1YZD3_9PORP
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EFK61009.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Bacterial mobilisation protein (MobC).
L3_121_000G1_scaffold_680_7
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5498..6418
DNA (921bp) protein (307aa)
Relaxase/mobilization nuclease domain protein n=3 Tax=Bacteroidales RepID=E1YZD4_9PORP
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EGF59590.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
Relaxase/mobilization nuclease
L3_121_000G1_scaffold_680_8
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6423..7142
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=F3PNR5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF59591.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_121_000G1_scaffold_680_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7226..7918)
DNA (693bp) protein (231aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=E1YZD6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31106.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_121_000G1_scaffold_680_10
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7943..9946)
DNA (2004bp) protein (668aa)
TonB family domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PNR8_9BACE
TonB family domain protein {ECO:0000313|EMBL:EGF59594.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_121_000G1_scaffold_680_11
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10206..11036)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=F3PNR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFK61014.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_121_000G1_scaffold_680_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11150..12316)
DNA (1167bp) protein (389aa)
Site-specific recombinase, phage integrase family n=2 Tax=Parabacteroides merdae RepID=A7A9J6_9PORP
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDN88303.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Site-specific recombinase XerD
L3_121_000G1_scaffold_680_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12732..13892
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y294_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12547.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_680_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13928..14086
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7A9J2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12548.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_121_000G1_scaffold_680_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14213..17608
DNA (3396bp) protein (1132aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X092_9PORP
two-component system sensor histidine kinase
L3_121_000G1_scaffold_680_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17636..18847
DNA (1212bp) protein (404aa)
L-fucose:H+ symporter permease n=3 Tax=Parabacteroides RepID=A7ACH6_9PORP
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EDN87516.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
fucose permease
L3_121_000G1_scaffold_680_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18921..19802)
DNA (882bp) protein (294aa)
Kinase, PfkB family n=5 Tax=Parabacteroides RepID=A7ACH5_9PORP
Kinase, PfkB family {ECO:0000313|EMBL:EEC98247.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
ribokinase
L3_121_000G1_scaffold_680_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20390..20959
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BFJ1_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN87514.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase sigma-70 factor
L3_121_000G1_scaffold_680_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21028..22011
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WN05_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12553.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_680_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22159..25593
DNA (3435bp) protein (1145aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7AJ35_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN85402.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
collagen-binding protein
L3_121_000G1_scaffold_680_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25604..27454
DNA (1851bp) protein (617aa)
SusD family protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJ34_9PORP
SusD family protein {ECO:0000313|EMBL:EDN85401.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
starch-binding protein
L3_121_000G1_scaffold_680_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27488..28750
DNA (1263bp) protein (421aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AJ33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85400.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_121_000G1_scaffold_680_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28906..29058)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7B5K9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98239.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
L3_121_000G1_scaffold_680_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29513..30799)
DNA (1287bp) protein (429aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Parabacteroides RepID=B7B5K8_9PORP
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
L3_121_000G1_scaffold_680_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30896..31756
DNA (861bp) protein (287aa)
Dihydropteroate synthase n=3 Tax=Parabacteroides merdae RepID=A7AJ28_9PORP
Dihydropteroate synthase {ECO:0000313|EMBL:EKN13986.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
dihydropteroate synthase
L3_121_000G1_scaffold_680_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31761..32546
DNA (786bp) protein (262aa)
TIGR00159 family protein n=3 Tax=Parabacteroides RepID=A7AJ27_9PORP
TIGR00159 family protein {ECO:0000313|EMBL:CDD14390.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_121_000G1_scaffold_680_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32679..33692
DNA (1014bp) protein (338aa)
Phosphate acetyltransferase n=5 Tax=Parabacteroides RepID=A7AJ26_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14389.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphotransacetylase/phosphate acetyltransferase
L3_121_000G1_scaffold_680_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33778..34977
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Acetate kinase n=4 Tax=Parabacteroides RepID=A7AJ25_9PORP
acetate kinase
L3_121_000G1_scaffold_680_29
unknown

Not on your lists

comp(35062..35679)
DNA (618bp) protein (206aa)

This feature has no annotations

L3_121_000G1_scaffold_680_30
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35676..37007)
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7AIT8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC53408.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
hypothetical protein
Displaying items 1-30 of 98 in total

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